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ZNF551
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:1.0 nTPM
HPA:1.0 nTPM
GTEx:3.1 nTPM
FANTOM5:6.7 Scaled Tags Per Million
Pig:21.4 nTPM
Mouse:4.6 nTPM
Allen mouse:0.0 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 1.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.9
2289 Male, age 61, right hemisphere 1.4
1854 Male, age 80, left hemisphere 1.3
1857 Female, age 85, left hemisphere 1.1
1781 Male, age 74, unknown 1.0
2288 Male, age 75, left hemisphere 0.6
2481 Female, age 94, left hemisphere 0.6
2290 Female, age 72, unknown 0.5
2846 Female, age 79, unknown 0.3
Claustrum
nTPM: 0.7
2392 Female, age 94, both hemispheres 1.4
2568 Male, age 61, both hemispheres 0.9
1956 Male, age 74, unknown 0.8
2198 Male, age 80, both hemispheres 0.8
2645 Female, age 72, unknown 0.6
2491 Male, age 75, both hemispheres 0.5
2284 Female, age 91, both hemispheres 0.4
2292 Female, age 85, both hemispheres 0.4
2196 Female, age 79, unknown 0.1
Globus pallidus, externus
nTPM: 0.7
2567 Female, age 72, unknown 2.1
2646 Male, age 61, right hemisphere 1.1
2395 Male, age 75, both hemispheres 0.1
1996 Male, age 80, right hemisphere 0.0
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 0.6
2566 Female, age 72, unknown 1.7
2111 Female, age 85, right hemisphere 1.1
2778 Female, age 91, both hemispheres 0.5
1818 Male, age 74, unknown 0.4
2287 Male, age 75, right hemisphere 0.4
2037 Male, age 80, right hemisphere 0.2
2483 Female, age 94, right hemisphere 0.0
Nucleus accumbens
nTPM: 0.8
1783 Male, age 74, unknown 1.6
2824 Male, age 61, right hemisphere 1.6
2732 Male, age 80, right hemisphere 1.4
1856 Female, age 91, right hemisphere 0.7
2391 Female, age 94, left hemisphere 0.7
1806 Female, age 85, left hemisphere 0.4
2286 Male, age 75, left hemisphere 0.2
2698 Female, age 72, unknown 0.2
Nucleus basalis of Meynert
nTPM: 0.9
2393 Male, age 80, right hemisphere 1.4
2484 Female, age 94, left hemisphere 1.0
2569 Male, age 61, both hemispheres 0.9
2821 Male, age 75, both hemispheres 0.3
Nucleus of the diagonal band
nTPM: 0.7
1979 Male, age 74, unknown 1.4
2029 Male, age 61, right hemisphere 0.8
2775 Male, age 80, right hemisphere 0.8
2195 Female, age 85, both hemispheres 0.7
1812 Female, age 91, both hemispheres 0.0
Olfactory tubercle
nTPM: 0.7
1998 Female, age 91, both hemispheres 0.8
2856 Male, age 75, right hemisphere 0.8
1846 Male, age 80, right hemisphere 0.7
2487 Female, age 94, left hemisphere 0.7
Putamen
nTPM: 1.0
2489 Female, age 72, unknown 1.6
1838 Male, age 80, right hemisphere 1.1
2466 Female, age 79, unknown 1.1
1829 Male, age 74, unknown 1.0
2647 Male, age 75, left hemisphere 0.9
1937 Female, age 91, right hemisphere 0.7
2482 Female, age 94, left hemisphere 0.6
Septal nuclei
nTPM: 1.0
2059 Female, age 85, both hemispheres 1.6
2199 Male, age 80, right hemisphere 1.6
1960 Male, age 74, unknown 1.2
2394 Male, age 61, left hemisphere 0.8
2629 Female, age 94, right hemisphere 0.8
2009 Female, age 91, both hemispheres 0.7
2031 Female, age 72, unknown 0.4

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 3.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2.3
Samples: 246

Max nTPM: 6.1
Min nTPM: 0.4
Std nTPM: 0.8
Median nTPM: 2.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 6.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 5.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 4.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 4.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 4.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 4.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 4.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 4.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 3.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 3.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 3.1
Samples: 246

Max nTPM: 9.3
Min nTPM: 0.7
Std nTPM: 1.3
Median nTPM: 2.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 9.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 8.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 7.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 7.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 7.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 7.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 6.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 6.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 6.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 6.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 5.9
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Brain - Putamen (basal ganglia)
Average nTPM: 1.8
Samples: 205

Max nTPM: 4.2
Min nTPM: 0.6
Std nTPM: 0.6
Median nTPM: 1.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 4.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 4.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 3.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 3.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 3.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 3.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 3.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 3.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 3.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 3.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 2.9
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 4.2
FF:10164-103B2 76 years, female 4.2
Globus pallidus
Scaled Tags Per Million: 6.7
FF:10161-103A8 76 years, female 7.9
FF:10175-103C4 60 years, female 5.5
Nucleus accumbens
Scaled Tags Per Million: 6.2
FF:10037-101F1 23-56 years, mixed 6.2
Putamen
Scaled Tags Per Million: 6.7
FF:10176-103C5 60 years, female 6.7

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 21.4
Pig sample Sample description nTPM
Caudate
nTPM: 19.0
Samples: 4

Max nTPM: 20.1
Min nTPM: 17.8
Sample A Female 18.3
Sample B Female 17.8
Sample C Male 19.7
Sample D Male 20.1
Putamen
nTPM: 21.2
Samples: 4

Max nTPM: 22.7
Min nTPM: 18.9
Sample A Female 22.4
Sample B Female 18.9
Sample C Male 22.7
Sample D Male 20.7
Septum
nTPM: 20.4
Samples: 4

Max nTPM: 21.5
Min nTPM: 19.6
Sample A Female 19.9
Sample B Female 19.6
Sample C Male 21.5
Sample D Male 20.7
Ventral pallidum
nTPM: 21.4
Samples: 4

Max nTPM: 24.0
Min nTPM: 19.1
Sample A Female 19.7
Sample B Female 19.1
Sample C Male 24.0
Sample D Male 22.6

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 4.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 3.3
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.6
Sample A Male 4.0
Sample B Male 2.9
Sample C Female 3.8
Sample D Female 2.6
Septum
nTPM: 4.6
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.9
Sample A Male 5.2
Sample B Male 4.5
Sample C Female 3.9
Sample D Female 4.6
Ventral forebrain
nTPM: 3.7
Samples: 4

Max nTPM: 4.3
Min nTPM: 2.9
Sample A Male 3.4
Sample B Male 4.3
Sample C Female 2.9
Sample D Female 4.0

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
71211464 Antisense, RP_050816_01_F06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
71211464 Antisense, RP_050816_01_F06, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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