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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.1 nTPM
HPA:13.1 nTPM
GTEx:34.4 nTPM
FANTOM5:10.3 Scaled Tags Per Million
Pig:7.9 nTPM
Mouse:12.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066721
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.1
Sample id Sample description nTPM
Hippocampus
nTPM: 11.1
2148 Female, age 91, left hemisphere 13.5
1898 Male, age 80, left hemisphere 12.2
2621 Female, age 67, right hemisphere 11.0
1911 Female, age 85, right hemisphere 10.7
2529 Female, age 94, left hemisphere 9.7
1855 Male, age 76, left hemisphere 9.3
Dentate gyrus
nTPM: 12.1
2531 Female, age 67, both hemispheres 17.0
1927 Female, age 91, both hemispheres 12.9
2530 Female, age 94, left hemisphere 12.5
2528 Male, age 74, both hemispheres 11.7
2246 Female, age 85, both hemispheres 9.3
2010 Male, age 76, both hemispheres 9.2
Entorhinal gyrus
nTPM: 12.3
2764 Male, age 80, right hemisphere 14.6
1787 Male, age 76, left hemisphere 13.9
2613 Female, age 94, left hemisphere 13.6
2686 Male, age 75, right hemisphere 12.8
1938 Female, age 85, left hemisphere 11.7
2117 Female, age 91, right hemisphere 7.0
Hippocampus, CA1
nTPM: 12.5
2749 Male, age 80, left hemisphere 16.6
2045 Male, age 76, both hemispheres 12.2
2082 Female, age 91, right hemisphere 12.0
2527 Male, age 74, both hemispheres 11.3
1873 Female, age 85, both hemispheres 10.3
Hippocampus, CA2
nTPM: 10.4
1892 Male, age 76, both hemispheres 12.2
2437 Female, age 94, left hemisphere 11.3
2113 Female, age 91, right hemisphere 10.6
2249 Male, age 74, both hemispheres 10.0
1963 Male, age 80, left hemisphere 9.6
1940 Female, age 85, left hemisphere 8.7
Hippocampus, CA3
nTPM: 13.1
2620 Female, age 94, left hemisphere 17.6
2861 Female, age 67, both hemispheres 16.8
2137 Male, age 80, left hemisphere 16.2
1867 Male, age 76, both hemispheres 10.7
1891 Female, age 85, both hemispheres 9.4
2436 Male, age 74, both hemispheres 7.7
Parahippocampal cortex
nTPM: 11.5
1990 Female, age 91, right hemisphere 13.7
2245 Female, age 91, both hemispheres 12.9
2250 Female, age 67, right hemisphere 12.5
2622 Female, age 67, right hemisphere 12.4
2693 Female, age 94, both hemispheres 12.3
1933 Female, age 85, both hemispheres 11.1
1850 Male, age 80, both hemispheres 10.8
2018 Male, age 76, both hemispheres 10.7
2532 Female, age 72, left hemisphere 9.5
2692 Male, age 74, both hemispheres 9.1
Perirhinal gyrus
nTPM: 11.5
1847 Female, age 91, left hemisphere 12.8
1794 Male, age 80, right hemisphere 12.0
2521 Female, age 94, right hemisphere 11.2
2848 Male, age 76, right hemisphere 10.9
1841 Female, age 85, right hemisphere 10.5
Subiculum
nTPM: 9.9
1901 Male, age 80, both hemispheres 11.5
1977 Female, age 85, both hemispheres 11.3
2729 Female, age 91, right hemisphere 10.3
2619 Male, age 74, both hemispheres 9.7
2042 Male, age 76, both hemispheres 9.0
2438 Female, age 94, left hemisphere 7.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.4
Samples: 197

Max nTPM: 89.2
Min nTPM: 6.2
Std nTPM: 15.1
Median nTPM: 34.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 89.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 77.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 76.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 72.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 71.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 68.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 61.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 61.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 60.1
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 59.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 58.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.3
FF:10153-102I9 76 years, female 11.2
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 8.8
Min nTPM: 5.3
Sample A Female 8.8
Sample B Female 7.0
Sample C Male 7.6
Sample D Male 5.3
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 9.4
Min nTPM: 6.4
Sample A Female 6.5
Sample B Female 9.4
Sample C Male 9.3
Sample D Male 6.4
Subiculum
nTPM: 6.0
Samples: 4

Max nTPM: 8.8
Min nTPM: 4.5
Sample A Female 8.8
Sample B Female 5.3
Sample C Male 5.4
Sample D Male 4.5
Ventral hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 8.2
Min nTPM: 5.0
Sample A Female 5.6
Sample B Female 5.0
Sample C Male 8.2
Sample D Male 7.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 16.7
Min nTPM: 9.3
Sample A Male 13.8
Sample B Male 16.7
Sample C Female 9.3
Sample D Female 10.7
Hippocampal formation
nTPM: 8.4
Samples: 4

Max nTPM: 9.9
Min nTPM: 6.8
Sample A Male 6.8
Sample B Male 9.9
Sample C Female 8.4
Sample D Female 8.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75990890 Antisense, RP_060608_01_G06, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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