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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.7 nTPM
HPA:13.7 nTPM
GTEx:12.0 nTPM
FANTOM5:75.9 Scaled Tags Per Million
Pig:9.8 nTPM
Mouse:22.9 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 10.6
1898 Male, age 80, left hemisphere 12.2
1911 Female, age 85, right hemisphere 11.7
1855 Male, age 76, left hemisphere 10.8
2621 Female, age 67, right hemisphere 10.6
2529 Female, age 94, left hemisphere 9.3
2148 Female, age 91, left hemisphere 8.8
Dentate gyrus
nTPM: 10.4
1927 Female, age 91, both hemispheres 13.0
2010 Male, age 76, both hemispheres 11.6
2246 Female, age 85, both hemispheres 11.2
2530 Female, age 94, left hemisphere 9.0
2528 Male, age 74, both hemispheres 8.9
2531 Female, age 67, both hemispheres 8.5
Entorhinal gyrus
nTPM: 11.2
1938 Female, age 85, left hemisphere 14.0
2117 Female, age 91, right hemisphere 12.0
2613 Female, age 94, left hemisphere 11.6
1787 Male, age 76, left hemisphere 11.1
2764 Male, age 80, right hemisphere 11.1
2686 Male, age 75, right hemisphere 7.3
Hippocampus, CA1
nTPM: 11.0
2749 Male, age 80, left hemisphere 14.0
1873 Female, age 85, both hemispheres 11.7
2527 Male, age 74, both hemispheres 9.9
2082 Female, age 91, right hemisphere 9.8
2045 Male, age 76, both hemispheres 9.5
Hippocampus, CA2
nTPM: 11.3
1892 Male, age 76, both hemispheres 15.1
2437 Female, age 94, left hemisphere 11.4
1940 Female, age 85, left hemisphere 10.9
2249 Male, age 74, both hemispheres 10.7
1963 Male, age 80, left hemisphere 10.0
2113 Female, age 91, right hemisphere 9.5
Hippocampus, CA3
nTPM: 11.1
2137 Male, age 80, left hemisphere 12.9
1867 Male, age 76, both hemispheres 12.5
1891 Female, age 85, both hemispheres 12.3
2436 Male, age 74, both hemispheres 11.1
2620 Female, age 94, left hemisphere 10.0
2861 Female, age 67, both hemispheres 7.7
Parahippocampal cortex
nTPM: 11.2
1850 Male, age 80, both hemispheres 14.0
2693 Female, age 94, both hemispheres 13.1
1933 Female, age 85, both hemispheres 12.9
2018 Male, age 76, both hemispheres 11.9
1990 Female, age 91, right hemisphere 11.7
2250 Female, age 67, right hemisphere 11.7
2245 Female, age 91, both hemispheres 10.1
2532 Female, age 72, left hemisphere 9.5
2692 Male, age 74, both hemispheres 8.8
2622 Female, age 67, right hemisphere 8.6
Perirhinal gyrus
nTPM: 13.7
1847 Female, age 91, left hemisphere 14.7
1841 Female, age 85, right hemisphere 14.4
1794 Male, age 80, right hemisphere 13.6
2848 Male, age 76, right hemisphere 13.6
2521 Female, age 94, right hemisphere 12.3
Subiculum
nTPM: 11.2
1977 Female, age 85, both hemispheres 13.3
1901 Male, age 80, both hemispheres 12.8
2042 Male, age 76, both hemispheres 11.4
2438 Female, age 94, left hemisphere 11.1
2729 Female, age 91, right hemisphere 9.5
2619 Male, age 74, both hemispheres 9.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.0
Samples: 197

Max nTPM: 25.0
Min nTPM: 4.5
Std nTPM: 3.1
Median nTPM: 11.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 25.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 22.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 20.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 19.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 19.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 18.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 18.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 18.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 17.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 17.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 17.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.9
FF:10169-103B7 60 years, female 96.2
FF:10153-102I9 76 years, female 55.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.4
Sample A Female 9.0
Sample B Female 7.9
Sample C Male 8.1
Sample D Male 6.4
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.9
Sample A Female 10.7
Sample B Female 10.5
Sample C Male 10.2
Sample D Male 7.9
Subiculum
nTPM: 9.2
Samples: 4

Max nTPM: 10.2
Min nTPM: 8.1
Sample A Female 10.2
Sample B Female 8.5
Sample C Male 8.1
Sample D Male 10.1
Ventral hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 9.0
Min nTPM: 7.0
Sample A Female 8.7
Sample B Female 8.5
Sample C Male 7.0
Sample D Male 9.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.9
Samples: 4

Max nTPM: 27.3
Min nTPM: 18.2
Sample A Male 18.2
Sample B Male 27.3
Sample C Female 22.9
Sample D Female 23.2
Hippocampal formation
nTPM: 21.7
Samples: 4

Max nTPM: 28.5
Min nTPM: 18.3
Sample A Male 28.5
Sample B Male 20.3
Sample C Female 19.6
Sample D Female 18.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
75990478 Antisense, RP_060608_01_C01, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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