ABOUTMENU
HELP
NEWS
SACM1L
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:14.0 nTPM
HPA:14.0 nTPM
GTEx:9.2 nTPM
FANTOM5:47.5 Scaled Tags Per Million
Pig:19.7 nTPM
Mouse:52.2 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039573
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.0
Sample id Sample description nTPM
Hippocampus
nTPM: 10.1
1898 Male, age 80, left hemisphere 13.6
1911 Female, age 85, right hemisphere 10.0
2621 Female, age 67, right hemisphere 9.6
1855 Male, age 76, left hemisphere 9.4
2148 Female, age 91, left hemisphere 9.1
2529 Female, age 94, left hemisphere 8.8
Dentate gyrus
nTPM: 9.1
1927 Female, age 91, both hemispheres 10.4
2010 Male, age 76, both hemispheres 9.6
2246 Female, age 85, both hemispheres 9.3
2528 Male, age 74, both hemispheres 9.3
2530 Female, age 94, left hemisphere 8.4
2531 Female, age 67, both hemispheres 7.8
Entorhinal gyrus
nTPM: 10.6
1938 Female, age 85, left hemisphere 12.8
2764 Male, age 80, right hemisphere 12.1
2117 Female, age 91, right hemisphere 10.8
1787 Male, age 76, left hemisphere 10.1
2613 Female, age 94, left hemisphere 9.6
2686 Male, age 75, right hemisphere 8.2
Hippocampus, CA1
nTPM: 11.0
2749 Male, age 80, left hemisphere 14.1
2527 Male, age 74, both hemispheres 11.0
1873 Female, age 85, both hemispheres 10.8
2082 Female, age 91, right hemisphere 9.8
2045 Male, age 76, both hemispheres 9.2
Hippocampus, CA2
nTPM: 11.1
2249 Male, age 74, both hemispheres 13.1
1892 Male, age 76, both hemispheres 12.5
1963 Male, age 80, left hemisphere 11.8
1940 Female, age 85, left hemisphere 10.1
2437 Female, age 94, left hemisphere 9.9
2113 Female, age 91, right hemisphere 9.2
Hippocampus, CA3
nTPM: 10.2
2436 Male, age 74, both hemispheres 13.1
2137 Male, age 80, left hemisphere 11.9
1891 Female, age 85, both hemispheres 11.0
1867 Male, age 76, both hemispheres 10.6
2620 Female, age 94, left hemisphere 8.4
2861 Female, age 67, both hemispheres 6.1
Parahippocampal cortex
nTPM: 11.1
1850 Male, age 80, both hemispheres 16.1
2693 Female, age 94, both hemispheres 12.5
1933 Female, age 85, both hemispheres 11.9
2250 Female, age 67, right hemisphere 11.5
1990 Female, age 91, right hemisphere 11.2
2245 Female, age 91, both hemispheres 10.8
2692 Male, age 74, both hemispheres 10.8
2532 Female, age 72, left hemisphere 10.1
2018 Male, age 76, both hemispheres 7.9
2622 Female, age 67, right hemisphere 7.8
Perirhinal gyrus
nTPM: 14.0
1847 Female, age 91, left hemisphere 16.5
2521 Female, age 94, right hemisphere 14.8
1841 Female, age 85, right hemisphere 14.1
1794 Male, age 80, right hemisphere 14.0
2848 Male, age 76, right hemisphere 10.8
Subiculum
nTPM: 9.9
1901 Male, age 80, both hemispheres 12.4
2619 Male, age 74, both hemispheres 12.2
1977 Female, age 85, both hemispheres 11.5
2729 Female, age 91, right hemisphere 9.1
2042 Male, age 76, both hemispheres 8.0
2438 Female, age 94, left hemisphere 5.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.2
Samples: 197

Max nTPM: 17.8
Min nTPM: 2.2
Std nTPM: 3.0
Median nTPM: 9.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 17.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 17.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 16.5
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 16.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 15.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 15.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 14.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 14.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 14.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 14.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.5
FF:10153-102I9 76 years, female 51.1
FF:10169-103B7 60 years, female 43.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 22.1
Min nTPM: 15.6
Sample A Female 21.8
Sample B Female 19.2
Sample C Male 22.1
Sample D Male 15.6
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 22.4
Min nTPM: 17.2
Sample A Female 19.2
Sample B Female 22.4
Sample C Male 19.4
Sample D Male 17.2
Subiculum
nTPM: 19.1
Samples: 4

Max nTPM: 22.6
Min nTPM: 16.7
Sample A Female 22.6
Sample B Female 18.2
Sample C Male 16.7
Sample D Male 18.7
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 19.7
Min nTPM: 16.9
Sample A Female 18.9
Sample B Female 16.9
Sample C Male 17.0
Sample D Male 19.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.2
Samples: 4

Max nTPM: 55.4
Min nTPM: 46.9
Sample A Male 52.2
Sample B Male 55.4
Sample C Female 54.3
Sample D Female 46.9
Hippocampal formation
nTPM: 50.7
Samples: 4

Max nTPM: 52.0
Min nTPM: 49.0
Sample A Male 52.0
Sample B Male 50.3
Sample C Female 49.0
Sample D Female 51.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
74882832 Antisense, RP_060315_04_H04, Mouse strain C57BL/6J (56 days, male) 1.1
79394332 Antisense, RP_071018_03_C08, Mouse strain C57BL/6J (56 days, male) 1.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.