ABOUTMENU
HELP
NEWS
PPP1CB
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:61.2 nTPM
HPA:61.2 nTPM
GTEx:63.7 nTPM
FANTOM5:197.2 Scaled Tags Per Million
Pig:153.0 nTPM
Mouse:118.4 nTPM
Allen mouse:2.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 61.2
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 51.4
1870 Female, age 42, unknown 59.5
2411 Female, age 72, unknown 57.7
2019 Male, age 18, unknown 56.7
1827 Male, age 72, unknown 55.4
2586 Male, age 75, left hemisphere 54.8
1830 Male, age 51, unknown 48.7
2666 Male, age 74, left hemisphere 47.9
1833 Male, age 53, unknown 47.7
2828 Female, age 72, unknown 47.3
2219 Male, age 76, both hemispheres 38.0
Dorsal raphe nucleus
nTPM: 61.2
2298 Female, age 72, unknown 76.8
2016 Female, age 72, unknown 63.3
1828 Male, age 53, unknown 56.5
2047 Male, age 72, unknown 55.0
2750 Male, age 76, both hemispheres 54.2
Inferior colliculus
nTPM: 54.1
2097 Female, age 72, unknown 60.9
1890 Male, age 53, unknown 57.2
1848 Female, age 42, unknown 49.7
2849 Male, age 72, unknown 48.4
Median raphe nucleus
nTPM: 54.4
2220 Male, age 76, midline 54.4
Pedunculopontine tegmental nucleus
nTPM: 52.6
1921 Female, age 85, both hemispheres 54.1
2334 Male, age 80, both hemispheres 53.3
2338 Male, age 61, both hemispheres 50.4
Periaquaductal grey, anterior
nTPM: 51.9
2502 Female, age 75, unknown 53.2
1795 Male, age 51, unknown 52.1
1947 Male, age 18, unknown 50.4
Periaquaductal grey, dorsal
nTPM: 59.7
2850 Male, age 76, both hemispheres 77.4
1840 Male, age 53, unknown 59.9
2464 Female, age 72, unknown 51.7
1831 Male, age 72, unknown 49.7
Periaquaductal grey, lateral
nTPM: 57.4
2140 Male, age 76, both hemispheres 61.8
2272 Male, age 74, both hemispheres 58.2
2053 Male, age 18, unknown 52.3
Pretectal area
nTPM: 57.4
2007 Male, age 72, unknown 66.7
2224 Female, age 72, unknown 65.9
1816 Male, age 51, unknown 65.7
2273 Male, age 74, both hemispheres 64.1
1815 Male, age 53, unknown 60.9
1944 Female, age 72, unknown 57.9
1817 Female, age 42, unknown 57.3
2316 Male, age 76, right hemisphere 55.2
2825 Male, age 18, unknown 49.3
2667 Female, age 75, unknown 49.0
2407 Male, age 75, both hemispheres 38.8
Red nucleus
nTPM: 55.6
2725 Female, age 75, unknown 65.5
1821 Female, age 72, unknown 65.1
2503 Female, age 72, unknown 62.0
1954 Female, age 42, unknown 58.6
2785 Male, age 18, unknown 57.9
1904 Male, age 53, unknown 56.4
2769 Male, age 72, unknown 54.9
2227 Male, age 72, unknown 53.3
1865 Male, age 51, unknown 52.7
2823 Male, age 76, right hemisphere 52.2
2588 Male, age 74, left hemisphere 50.1
2584 Male, age 75, left hemisphere 38.7
Substantia nigra
nTPM: 58.6
1851 Male, age 51, unknown 64.4
1916 Female, age 42, unknown 61.9
2241 Male, age 72, unknown 61.9
2665 Male, age 74, both hemispheres 61.1
1889 Female, age 72, unknown 59.6
2409 Female, age 72, unknown 58.8
2590 Female, age 75, unknown 58.8
2699 Male, age 18, unknown 56.4
1941 Male, age 53, unknown 53.7
2583 Male, age 75, right hemisphere 49.9
Superior colliculus
nTPM: 53.8
2261 Male, age 18, unknown 61.9
1995 Male, age 72, unknown 59.8
1913 Female, age 42, unknown 59.6
1796 Male, age 53, unknown 57.3
2087 Female, age 72, unknown 57.2
2587 Male, age 74, left hemisphere 51.3
2668 Female, age 75, unknown 50.6
1839 Male, age 51, unknown 48.8
1895 Male, age 76, right hemisphere 47.3
2664 Male, age 75, both hemispheres 44.4
Ventral tegmental area
nTPM: 56.5
2410 Female, age 72, unknown 59.7
1915 Female, age 42, unknown 58.5
2218 Male, age 76, both hemispheres 56.2
2223 Female, age 72, unknown 56.2
2021 Male, age 53, unknown 55.6
1942 Male, age 51, unknown 52.8

MIDBRAIN - GTEx RNA-seqi
Average nTPM 63.7
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 63.7
Samples: 139

Max nTPM: 121.3
Min nTPM: 37.3
Std nTPM: 13.5
Median nTPM: 61.6
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 121.3
GTEX-13NYS-0011-R2b-SM-5MR4G 60-69 years, male 110.2
GTEX-YFC4-0011-R2a-SM-4V6DZ 40-49 years, female 106.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 98.6
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 90.5
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 88.2
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 87.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z 60-69 years, male 86.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ 60-69 years, male 84.7
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 84.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 83.3
Show allShow less

MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 197.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 197.2
FF:10158-103A5 76 years, female 197.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 153.0
Pig sample Sample description nTPM
Midbrain
nTPM: 153.0
Samples: 4

Max nTPM: 171.7
Min nTPM: 136.6
Sample A Female 153.2
Sample B Female 150.6
Sample C Male 171.7
Sample D Male 136.6
Periaqueductal gray
nTPM: 124.9
Samples: 3

Max nTPM: 132.8
Min nTPM: 112.5
Sample B Female 129.4
Sample C Male 132.8
Sample D Male 112.5
Substantia nigra
nTPM: 138.9
Samples: 4

Max nTPM: 166.7
Min nTPM: 108.8
Sample A Female 166.7
Sample B Female 134.7
Sample C Male 145.4
Sample D Male 108.8
Superior colliculi
nTPM: 148.7
Samples: 4

Max nTPM: 166.7
Min nTPM: 119.3
Sample A Female 165.5
Sample B Female 119.3
Sample C Male 166.7
Sample D Male 143.3

MIDBRAIN - Mouse RNA-seqi
Average nTPM 118.4
Mouse sample Sample description nTPM
Midbrain
nTPM: 118.4
Samples: 4

Max nTPM: 122.3
Min nTPM: 113.3
Sample A Male 113.3
Sample B Male 122.3
Sample C Female 121.6
Sample D Female 116.4

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 2.1
69817205 Antisense, RP_050510_02_H04, Mouse strain C57BL/6J (56 days, male) 2.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.