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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:33.9 nTPM
HPA:33.9 nTPM
GTEx:24.2 nTPM
FANTOM5:28.7 Scaled Tags Per Million
Pig:4.8 nTPM
Mouse:34.5 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026661
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.9
Sample id Sample description nTPM
Hippocampus
nTPM: 28.7
2529 Female, age 94, left hemisphere 31.2
2148 Female, age 91, left hemisphere 30.4
2621 Female, age 67, right hemisphere 28.5
1898 Male, age 80, left hemisphere 28.4
1911 Female, age 85, right hemisphere 27.3
1855 Male, age 76, left hemisphere 26.4
Dentate gyrus
nTPM: 29.1
2531 Female, age 67, both hemispheres 30.8
2246 Female, age 85, both hemispheres 29.9
1927 Female, age 91, both hemispheres 29.4
2530 Female, age 94, left hemisphere 28.9
2528 Male, age 74, both hemispheres 28.5
2010 Male, age 76, both hemispheres 27.2
Entorhinal gyrus
nTPM: 33.9
2764 Male, age 80, right hemisphere 37.4
2117 Female, age 91, right hemisphere 35.5
2613 Female, age 94, left hemisphere 34.8
2686 Male, age 75, right hemisphere 33.7
1938 Female, age 85, left hemisphere 31.4
1787 Male, age 76, left hemisphere 30.3
Hippocampus, CA1
nTPM: 26.8
2082 Female, age 91, right hemisphere 29.3
2527 Male, age 74, both hemispheres 28.9
2045 Male, age 76, both hemispheres 26.9
1873 Female, age 85, both hemispheres 24.5
2749 Male, age 80, left hemisphere 24.5
Hippocampus, CA2
nTPM: 29.7
1940 Female, age 85, left hemisphere 35.7
2437 Female, age 94, left hemisphere 32.3
2113 Female, age 91, right hemisphere 28.8
2249 Male, age 74, both hemispheres 28.5
1892 Male, age 76, both hemispheres 27.0
1963 Male, age 80, left hemisphere 25.8
Hippocampus, CA3
nTPM: 29.8
2861 Female, age 67, both hemispheres 31.7
1891 Female, age 85, both hemispheres 31.6
2620 Female, age 94, left hemisphere 31.1
1867 Male, age 76, both hemispheres 30.8
2436 Male, age 74, both hemispheres 29.6
2137 Male, age 80, left hemisphere 24.2
Parahippocampal cortex
nTPM: 31.7
1990 Female, age 91, right hemisphere 36.0
2692 Male, age 74, both hemispheres 35.6
2622 Female, age 67, right hemisphere 33.8
1850 Male, age 80, both hemispheres 31.2
2693 Female, age 94, both hemispheres 30.7
1933 Female, age 85, both hemispheres 30.5
2018 Male, age 76, both hemispheres 30.0
2532 Female, age 72, left hemisphere 30.0
2245 Female, age 91, both hemispheres 29.7
2250 Female, age 67, right hemisphere 29.3
Perirhinal gyrus
nTPM: 29.6
1847 Female, age 91, left hemisphere 31.5
2521 Female, age 94, right hemisphere 29.8
2848 Male, age 76, right hemisphere 29.8
1794 Male, age 80, right hemisphere 29.4
1841 Female, age 85, right hemisphere 27.7
Subiculum
nTPM: 32.0
2438 Female, age 94, left hemisphere 35.4
1901 Male, age 80, both hemispheres 32.5
1977 Female, age 85, both hemispheres 32.3
2619 Male, age 74, both hemispheres 32.2
2042 Male, age 76, both hemispheres 29.8
2729 Female, age 91, right hemisphere 29.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.2
Samples: 197

Max nTPM: 72.7
Min nTPM: 9.2
Std nTPM: 10.1
Median nTPM: 22.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 72.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 70.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 57.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 56.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 48.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 48.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 46.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 43.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 43.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 43.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.7
FF:10153-102I9 76 years, female 46.0
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 5.5
Min nTPM: 4.1
Sample A Female 4.4
Sample B Female 4.1
Sample C Male 5.5
Sample D Male 4.1
Entorhinal cortex
nTPM: 4.9
Samples: 4

Max nTPM: 5.0
Min nTPM: 4.8
Sample A Female 4.8
Sample B Female 4.8
Sample C Male 5.0
Sample D Male 4.8
Subiculum
nTPM: 4.5
Samples: 4

Max nTPM: 6.1
Min nTPM: 3.7
Sample A Female 6.1
Sample B Female 4.0
Sample C Male 4.0
Sample D Male 3.7
Ventral hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.5
Sample A Female 4.1
Sample B Female 3.9
Sample C Male 5.5
Sample D Male 3.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.5
Samples: 4

Max nTPM: 44.9
Min nTPM: 24.3
Sample A Male 44.9
Sample B Male 42.4
Sample C Female 26.2
Sample D Female 24.3
Hippocampal formation
nTPM: 19.3
Samples: 4

Max nTPM: 22.2
Min nTPM: 16.3
Sample A Male 20.4
Sample B Male 18.2
Sample C Female 16.3
Sample D Female 22.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
72002106 Antisense, RP_050915_02_G01, Mouse strain C57BL/6J (56 days, male) 0.3

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