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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:53.9 nTPM
HPA:53.9 nTPM
GTEx:85.3 nTPM
FANTOM5:28.1 Scaled Tags Per Million
Pig:55.1 nTPM
Mouse:85.2 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB025629
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.9
Sample id Sample description nTPM
Hippocampus
nTPM: 50.8
2148 Female, age 91, left hemisphere 53.3
1911 Female, age 85, right hemisphere 52.5
2621 Female, age 67, right hemisphere 51.7
1855 Male, age 76, left hemisphere 50.3
1898 Male, age 80, left hemisphere 49.7
2529 Female, age 94, left hemisphere 47.0
Dentate gyrus
nTPM: 51.4
2530 Female, age 94, left hemisphere 59.0
2531 Female, age 67, both hemispheres 54.1
1927 Female, age 91, both hemispheres 53.7
2010 Male, age 76, both hemispheres 48.2
2246 Female, age 85, both hemispheres 48.1
2528 Male, age 74, both hemispheres 45.0
Entorhinal gyrus
nTPM: 30.2
2686 Male, age 75, right hemisphere 32.9
1787 Male, age 76, left hemisphere 32.7
2117 Female, age 91, right hemisphere 31.6
2764 Male, age 80, right hemisphere 31.4
2613 Female, age 94, left hemisphere 27.8
1938 Female, age 85, left hemisphere 24.9
Hippocampus, CA1
nTPM: 53.9
2749 Male, age 80, left hemisphere 82.1
1873 Female, age 85, both hemispheres 52.9
2527 Male, age 74, both hemispheres 46.4
2082 Female, age 91, right hemisphere 44.4
2045 Male, age 76, both hemispheres 43.8
Hippocampus, CA2
nTPM: 45.8
1963 Male, age 80, left hemisphere 71.5
1892 Male, age 76, both hemispheres 45.6
2113 Female, age 91, right hemisphere 43.9
2249 Male, age 74, both hemispheres 41.1
2437 Female, age 94, left hemisphere 38.5
1940 Female, age 85, left hemisphere 34.0
Hippocampus, CA3
nTPM: 51.2
2137 Male, age 80, left hemisphere 73.7
2861 Female, age 67, both hemispheres 73.2
2620 Female, age 94, left hemisphere 52.7
1867 Male, age 76, both hemispheres 41.0
2436 Male, age 74, both hemispheres 33.7
1891 Female, age 85, both hemispheres 33.1
Parahippocampal cortex
nTPM: 34.5
2245 Female, age 91, both hemispheres 48.4
2250 Female, age 67, right hemisphere 43.8
2622 Female, age 67, right hemisphere 42.9
2018 Male, age 76, both hemispheres 40.2
2693 Female, age 94, both hemispheres 33.9
1933 Female, age 85, both hemispheres 30.1
2532 Female, age 72, left hemisphere 29.7
2692 Male, age 74, both hemispheres 28.5
1990 Female, age 91, right hemisphere 25.0
1850 Male, age 80, both hemispheres 22.1
Perirhinal gyrus
nTPM: 33.4
2521 Female, age 94, right hemisphere 44.2
1794 Male, age 80, right hemisphere 33.6
1841 Female, age 85, right hemisphere 31.1
1847 Female, age 91, left hemisphere 30.6
2848 Male, age 76, right hemisphere 27.1
Subiculum
nTPM: 35.5
1901 Male, age 80, both hemispheres 43.0
2729 Female, age 91, right hemisphere 41.1
2042 Male, age 76, both hemispheres 39.9
2619 Male, age 74, both hemispheres 34.5
1977 Female, age 85, both hemispheres 29.8
2438 Female, age 94, left hemisphere 24.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.3
Samples: 197

Max nTPM: 175.2
Min nTPM: 13.6
Std nTPM: 27.2
Median nTPM: 82.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 175.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 152.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 150.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 149.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 146.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 143.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 141.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 137.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 137.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 137.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 137.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.1
FF:10153-102I9 76 years, female 31.1
FF:10169-103B7 60 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.1
Samples: 4

Max nTPM: 69.9
Min nTPM: 42.4
Sample A Female 69.9
Sample B Female 59.5
Sample C Male 48.7
Sample D Male 42.4
Entorhinal cortex
nTPM: 48.0
Samples: 4

Max nTPM: 64.4
Min nTPM: 35.0
Sample A Female 47.4
Sample B Female 45.0
Sample C Male 64.4
Sample D Male 35.0
Subiculum
nTPM: 44.9
Samples: 4

Max nTPM: 63.9
Min nTPM: 35.2
Sample A Female 63.9
Sample B Female 39.4
Sample C Male 41.0
Sample D Male 35.2
Ventral hippocampus
nTPM: 48.8
Samples: 4

Max nTPM: 57.4
Min nTPM: 38.6
Sample A Female 48.8
Sample B Female 38.6
Sample C Male 57.4
Sample D Male 50.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.9
Samples: 4

Max nTPM: 64.8
Min nTPM: 58.1
Sample A Male 58.1
Sample B Male 58.4
Sample C Female 62.1
Sample D Female 64.8
Hippocampal formation
nTPM: 85.2
Samples: 4

Max nTPM: 98.8
Min nTPM: 74.4
Sample A Male 74.4
Sample B Male 84.5
Sample C Female 98.8
Sample D Female 83.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
69059974 Antisense, RP_050317_04_H07, Mouse strain C57BL/6J (56 days, male) 12.1

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