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TMA7
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:502.2 nTPM
HPA:502.2 nTPM
GTEx:432.8 nTPM
FANTOM5:78.2 Scaled Tags Per Million
Pig:117.3 nTPM
Mouse:138.0 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 502.2
Sample id Sample description nTPM
Hippocampus
nTPM: 502.2
2529 Female, age 94, left hemisphere 511.6
1898 Male, age 80, left hemisphere 509.6
1855 Male, age 76, left hemisphere 505.2
1911 Female, age 85, right hemisphere 497.7
2621 Female, age 67, right hemisphere 497.1
2148 Female, age 91, left hemisphere 492.2
Dentate gyrus
nTPM: 491.7
2530 Female, age 94, left hemisphere 499.2
1927 Female, age 91, both hemispheres 496.9
2010 Male, age 76, both hemispheres 495.7
2246 Female, age 85, both hemispheres 494.4
2531 Female, age 67, both hemispheres 484.8
2528 Male, age 74, both hemispheres 479.5
Entorhinal gyrus
nTPM: 492.3
1938 Female, age 85, left hemisphere 502.1
2686 Male, age 75, right hemisphere 495.7
1787 Male, age 76, left hemisphere 494.8
2117 Female, age 91, right hemisphere 493.0
2764 Male, age 80, right hemisphere 488.3
2613 Female, age 94, left hemisphere 480.0
Hippocampus, CA1
nTPM: 497.7
2749 Male, age 80, left hemisphere 506.8
2527 Male, age 74, both hemispheres 504.8
2045 Male, age 76, both hemispheres 499.1
1873 Female, age 85, both hemispheres 497.3
2082 Female, age 91, right hemisphere 480.5
Hippocampus, CA2
nTPM: 493.1
1892 Male, age 76, both hemispheres 505.9
2437 Female, age 94, left hemisphere 496.2
1963 Male, age 80, left hemisphere 492.8
2249 Male, age 74, both hemispheres 492.1
1940 Female, age 85, left hemisphere 486.8
2113 Female, age 91, right hemisphere 484.6
Hippocampus, CA3
nTPM: 491.9
1867 Male, age 76, both hemispheres 501.5
1891 Female, age 85, both hemispheres 498.2
2137 Male, age 80, left hemisphere 498.2
2436 Male, age 74, both hemispheres 493.4
2861 Female, age 67, both hemispheres 481.8
2620 Female, age 94, left hemisphere 478.0
Parahippocampal cortex
nTPM: 497.2
2245 Female, age 91, both hemispheres 508.4
2250 Female, age 67, right hemisphere 503.8
1933 Female, age 85, both hemispheres 503.2
2018 Male, age 76, both hemispheres 503.0
1850 Male, age 80, both hemispheres 500.2
2532 Female, age 72, left hemisphere 496.1
1990 Female, age 91, right hemisphere 493.7
2693 Female, age 94, both hemispheres 489.0
2622 Female, age 67, right hemisphere 488.0
2692 Male, age 74, both hemispheres 486.9
Perirhinal gyrus
nTPM: 501.6
1841 Female, age 85, right hemisphere 518.0
1794 Male, age 80, right hemisphere 500.4
1847 Female, age 91, left hemisphere 500.1
2521 Female, age 94, right hemisphere 496.8
2848 Male, age 76, right hemisphere 492.8
Subiculum
nTPM: 497.8
2438 Female, age 94, left hemisphere 508.1
2042 Male, age 76, both hemispheres 503.4
1901 Male, age 80, both hemispheres 502.5
1977 Female, age 85, both hemispheres 498.1
2619 Male, age 74, both hemispheres 489.3
2729 Female, age 91, right hemisphere 485.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 432.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 432.8
Samples: 197

Max nTPM: 1213.6
Min nTPM: 220.9
Std nTPM: 121.6
Median nTPM: 413.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1213.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 997.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 787.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 762.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 716.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 702.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 690.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 673.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 673.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 664.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 636.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.2
FF:10153-102I9 76 years, female 86.3
FF:10169-103B7 60 years, female 70.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 117.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 117.3
Samples: 4

Max nTPM: 161.3
Min nTPM: 82.8
Sample A Female 161.3
Sample B Female 113.7
Sample C Male 111.3
Sample D Male 82.8
Entorhinal cortex
nTPM: 110.2
Samples: 4

Max nTPM: 133.3
Min nTPM: 87.4
Sample A Female 94.1
Sample B Female 133.3
Sample C Male 125.9
Sample D Male 87.4
Subiculum
nTPM: 103.9
Samples: 4

Max nTPM: 141.8
Min nTPM: 85.0
Sample A Female 141.8
Sample B Female 96.7
Sample C Male 85.0
Sample D Male 92.0
Ventral hippocampus
nTPM: 101.4
Samples: 4

Max nTPM: 110.4
Min nTPM: 92.2
Sample A Female 110.4
Sample B Female 92.2
Sample C Male 100.0
Sample D Male 102.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 138.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 138.0
Samples: 4

Max nTPM: 147.5
Min nTPM: 131.4
Sample A Male 131.4
Sample B Male 141.3
Sample C Female 147.5
Sample D Female 131.6
Hippocampal formation
nTPM: 124.6
Samples: 4

Max nTPM: 156.8
Min nTPM: 112.3
Sample A Male 156.8
Sample B Male 115.1
Sample C Female 112.3
Sample D Female 114.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
71763951 Antisense, RP_050921_02_H07, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

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