ABOUTMENU
HELP
NEWS
NME1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:88.0 nTPM
HPA:88.0 nTPM
GTEx:111.3 nTPM
FANTOM5:82.8 Scaled Tags Per Million
Pig:48.6 nTPM
Mouse:196.9 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008467Antibody HPA041113Antibody CAB040571
Glial cells HighMediumNot detected
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.0
Sample id Sample description nTPM
Hippocampus
nTPM: 79.4
1898 Male, age 80, left hemisphere 93.0
2621 Female, age 67, right hemisphere 81.0
1855 Male, age 76, left hemisphere 79.7
1911 Female, age 85, right hemisphere 77.6
2148 Female, age 91, left hemisphere 75.1
2529 Female, age 94, left hemisphere 70.1
Dentate gyrus
nTPM: 77.8
1927 Female, age 91, both hemispheres 88.4
2010 Male, age 76, both hemispheres 82.4
2246 Female, age 85, both hemispheres 76.0
2530 Female, age 94, left hemisphere 74.6
2531 Female, age 67, both hemispheres 73.1
2528 Male, age 74, both hemispheres 72.2
Entorhinal gyrus
nTPM: 76.3
1938 Female, age 85, left hemisphere 81.4
2764 Male, age 80, right hemisphere 81.2
1787 Male, age 76, left hemisphere 76.4
2613 Female, age 94, left hemisphere 75.2
2686 Male, age 75, right hemisphere 71.8
2117 Female, age 91, right hemisphere 71.6
Hippocampus, CA1
nTPM: 88.0
2749 Male, age 80, left hemisphere 120.4
1873 Female, age 85, both hemispheres 82.5
2527 Male, age 74, both hemispheres 82.2
2045 Male, age 76, both hemispheres 80.2
2082 Female, age 91, right hemisphere 75.0
Hippocampus, CA2
nTPM: 81.4
1892 Male, age 76, both hemispheres 93.3
1963 Male, age 80, left hemisphere 91.9
2249 Male, age 74, both hemispheres 80.7
2437 Female, age 94, left hemisphere 74.8
1940 Female, age 85, left hemisphere 73.7
2113 Female, age 91, right hemisphere 73.7
Hippocampus, CA3
nTPM: 83.9
2137 Male, age 80, left hemisphere 104.3
1867 Male, age 76, both hemispheres 89.5
2436 Male, age 74, both hemispheres 85.9
1891 Female, age 85, both hemispheres 76.9
2861 Female, age 67, both hemispheres 73.9
2620 Female, age 94, left hemisphere 73.0
Parahippocampal cortex
nTPM: 77.9
1850 Male, age 80, both hemispheres 84.0
2245 Female, age 91, both hemispheres 82.6
2250 Female, age 67, right hemisphere 81.0
2018 Male, age 76, both hemispheres 79.6
1990 Female, age 91, right hemisphere 79.5
1933 Female, age 85, both hemispheres 77.8
2693 Female, age 94, both hemispheres 76.4
2532 Female, age 72, left hemisphere 74.2
2692 Male, age 74, both hemispheres 72.4
2622 Female, age 67, right hemisphere 72.0
Perirhinal gyrus
nTPM: 84.1
1847 Female, age 91, left hemisphere 94.1
1794 Male, age 80, right hemisphere 85.2
1841 Female, age 85, right hemisphere 83.6
2521 Female, age 94, right hemisphere 79.1
2848 Male, age 76, right hemisphere 78.5
Subiculum
nTPM: 77.7
1901 Male, age 80, both hemispheres 86.5
1977 Female, age 85, both hemispheres 80.6
2042 Male, age 76, both hemispheres 79.1
2438 Female, age 94, left hemisphere 75.8
2619 Male, age 74, both hemispheres 73.0
2729 Female, age 91, right hemisphere 71.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 111.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 111.3
Samples: 197

Max nTPM: 295.3
Min nTPM: 32.4
Std nTPM: 53.0
Median nTPM: 100.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 295.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 273.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 272.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 266.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 244.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 243.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 229.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 224.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 220.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 219.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 211.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.8
FF:10169-103B7 60 years, female 128.7
FF:10153-102I9 76 years, female 36.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.6
Samples: 4

Max nTPM: 54.2
Min nTPM: 41.0
Sample A Female 52.7
Sample B Female 54.2
Sample C Male 41.0
Sample D Male 46.6
Entorhinal cortex
nTPM: 34.5
Samples: 4

Max nTPM: 42.5
Min nTPM: 30.2
Sample A Female 30.2
Sample B Female 42.5
Sample C Male 33.4
Sample D Male 31.9
Subiculum
nTPM: 37.9
Samples: 4

Max nTPM: 44.5
Min nTPM: 33.0
Sample A Female 44.5
Sample B Female 39.9
Sample C Male 34.0
Sample D Male 33.0
Ventral hippocampus
nTPM: 44.9
Samples: 4

Max nTPM: 52.3
Min nTPM: 37.3
Sample A Female 41.9
Sample B Female 37.3
Sample C Male 48.0
Sample D Male 52.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 196.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 196.9
Samples: 4

Max nTPM: 218.0
Min nTPM: 173.1
Sample A Male 182.6
Sample B Male 173.1
Sample C Female 213.8
Sample D Female 218.0
Hippocampal formation
nTPM: 178.4
Samples: 4

Max nTPM: 196.0
Min nTPM: 157.9
Sample A Male 196.0
Sample B Male 157.9
Sample C Female 191.0
Sample D Female 168.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
75144617 Antisense, RP_051206_01_E08, Mouse strain C57BL/6J (56 days, male) 10.7
74277663 Antisense, RP_051206_01_E08, Mouse strain C57BL/6J (56 days, male) 6.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.