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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:658.1 nTPM
HPA:658.1 nTPM
GTEx:524.6 nTPM
FANTOM5:148.8 Scaled Tags Per Million
Pig:56.9 nTPM
Mouse:275.1 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA070412
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 658.1
Sample id Sample description nTPM
Hippocampus
nTPM: 647.7
1898 Male, age 80, left hemisphere 670.6
2529 Female, age 94, left hemisphere 652.8
2621 Female, age 67, right hemisphere 652.4
1855 Male, age 76, left hemisphere 651.7
1911 Female, age 85, right hemisphere 632.4
2148 Female, age 91, left hemisphere 626.1
Dentate gyrus
nTPM: 634.0
2010 Male, age 76, both hemispheres 652.9
1927 Female, age 91, both hemispheres 644.2
2246 Female, age 85, both hemispheres 640.8
2530 Female, age 94, left hemisphere 638.7
2528 Male, age 74, both hemispheres 620.7
2531 Female, age 67, both hemispheres 606.6
Entorhinal gyrus
nTPM: 632.1
1938 Female, age 85, left hemisphere 643.9
2764 Male, age 80, right hemisphere 642.8
1787 Male, age 76, left hemisphere 637.3
2117 Female, age 91, right hemisphere 629.2
2613 Female, age 94, left hemisphere 620.8
2686 Male, age 75, right hemisphere 618.4
Hippocampus, CA1
nTPM: 652.6
2749 Male, age 80, left hemisphere 692.3
2527 Male, age 74, both hemispheres 661.0
2045 Male, age 76, both hemispheres 653.2
1873 Female, age 85, both hemispheres 633.5
2082 Female, age 91, right hemisphere 623.1
Hippocampus, CA2
nTPM: 638.8
1892 Male, age 76, both hemispheres 674.2
1963 Male, age 80, left hemisphere 645.0
2249 Male, age 74, both hemispheres 642.6
2437 Female, age 94, left hemisphere 632.9
1940 Female, age 85, left hemisphere 623.1
2113 Female, age 91, right hemisphere 615.1
Hippocampus, CA3
nTPM: 642.4
2436 Male, age 74, both hemispheres 673.6
2137 Male, age 80, left hemisphere 655.8
1867 Male, age 76, both hemispheres 652.7
1891 Female, age 85, both hemispheres 631.0
2620 Female, age 94, left hemisphere 627.7
2861 Female, age 67, both hemispheres 613.6
Parahippocampal cortex
nTPM: 642.2
1850 Male, age 80, both hemispheres 663.8
2245 Female, age 91, both hemispheres 654.4
2250 Female, age 67, right hemisphere 649.5
2692 Male, age 74, both hemispheres 643.6
2018 Male, age 76, both hemispheres 641.8
1933 Female, age 85, both hemispheres 640.1
2532 Female, age 72, left hemisphere 639.1
1990 Female, age 91, right hemisphere 631.7
2622 Female, age 67, right hemisphere 630.2
2693 Female, age 94, both hemispheres 627.5
Perirhinal gyrus
nTPM: 658.1
1847 Female, age 91, left hemisphere 686.8
1794 Male, age 80, right hemisphere 670.9
1841 Female, age 85, right hemisphere 648.9
2521 Female, age 94, right hemisphere 643.0
2848 Male, age 76, right hemisphere 640.9
Subiculum
nTPM: 638.3
2438 Female, age 94, left hemisphere 657.4
1977 Female, age 85, both hemispheres 643.0
2619 Male, age 74, both hemispheres 642.2
1901 Male, age 80, both hemispheres 638.8
2729 Female, age 91, right hemisphere 624.3
2042 Male, age 76, both hemispheres 623.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 524.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 524.6
Samples: 197

Max nTPM: 1630.6
Min nTPM: 187.4
Std nTPM: 204.7
Median nTPM: 502.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1630.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1164.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1141.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1123.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1118.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1082.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1049.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 956.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 917.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 915.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 911.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 148.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 148.8
FF:10169-103B7 60 years, female 187.2
FF:10153-102I9 76 years, female 110.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.9
Samples: 4

Max nTPM: 72.5
Min nTPM: 44.2
Sample A Female 72.5
Sample B Female 57.3
Sample C Male 53.7
Sample D Male 44.2
Entorhinal cortex
nTPM: 50.3
Samples: 4

Max nTPM: 67.9
Min nTPM: 39.5
Sample A Female 47.8
Sample B Female 67.9
Sample C Male 46.1
Sample D Male 39.5
Subiculum
nTPM: 44.3
Samples: 4

Max nTPM: 55.8
Min nTPM: 38.4
Sample A Female 55.8
Sample B Female 38.4
Sample C Male 39.3
Sample D Male 43.6
Ventral hippocampus
nTPM: 52.8
Samples: 4

Max nTPM: 62.7
Min nTPM: 40.0
Sample A Female 62.7
Sample B Female 40.0
Sample C Male 55.6
Sample D Male 52.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 275.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 255.0
Samples: 4

Max nTPM: 284.7
Min nTPM: 239.0
Sample A Male 253.7
Sample B Male 239.0
Sample C Female 284.7
Sample D Female 242.5
Hippocampal formation
nTPM: 275.1
Samples: 4

Max nTPM: 319.0
Min nTPM: 241.1
Sample A Male 319.0
Sample B Male 241.1
Sample C Female 251.5
Sample D Female 288.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
75198094 Antisense, RP_060502_01_F10, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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