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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.0 nTPM
HPA:9.0 nTPM
GTEx:7.8 nTPM
FANTOM5:36.7 Scaled Tags Per Million
Mouse:102.3 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051501
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.0
Sample id Sample description nTPM
Hippocampus
nTPM: 7.7
1898 Male, age 80, left hemisphere 11.1
1911 Female, age 85, right hemisphere 9.5
1855 Male, age 76, left hemisphere 7.5
2148 Female, age 91, left hemisphere 6.9
2621 Female, age 67, right hemisphere 6.6
2529 Female, age 94, left hemisphere 4.6
Dentate gyrus
nTPM: 9.0
2530 Female, age 94, left hemisphere 12.7
2010 Male, age 76, both hemispheres 11.9
1927 Female, age 91, both hemispheres 8.9
2528 Male, age 74, both hemispheres 7.0
2531 Female, age 67, both hemispheres 7.0
2246 Female, age 85, both hemispheres 6.4
Entorhinal gyrus
nTPM: 6.1
1787 Male, age 76, left hemisphere 8.1
2117 Female, age 91, right hemisphere 8.0
2764 Male, age 80, right hemisphere 7.6
1938 Female, age 85, left hemisphere 6.2
2613 Female, age 94, left hemisphere 4.8
2686 Male, age 75, right hemisphere 1.9
Hippocampus, CA1
nTPM: 7.2
2749 Male, age 80, left hemisphere 14.2
1873 Female, age 85, both hemispheres 10.8
2045 Male, age 76, both hemispheres 7.6
2527 Male, age 74, both hemispheres 3.4
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 8.6
1963 Male, age 80, left hemisphere 16.2
1892 Male, age 76, both hemispheres 14.9
1940 Female, age 85, left hemisphere 6.9
2249 Male, age 74, both hemispheres 5.7
2437 Female, age 94, left hemisphere 5.3
2113 Female, age 91, right hemisphere 2.7
Hippocampus, CA3
nTPM: 6.2
1867 Male, age 76, both hemispheres 10.1
2137 Male, age 80, left hemisphere 8.5
1891 Female, age 85, both hemispheres 6.8
2620 Female, age 94, left hemisphere 6.5
2861 Female, age 67, both hemispheres 5.2
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 3.6
1990 Female, age 91, right hemisphere 7.8
2018 Male, age 76, both hemispheres 6.5
2245 Female, age 91, both hemispheres 5.7
2532 Female, age 72, left hemisphere 5.0
1933 Female, age 85, both hemispheres 4.2
2692 Male, age 74, both hemispheres 2.2
1850 Male, age 80, both hemispheres 2.0
2622 Female, age 67, right hemisphere 1.8
2250 Female, age 67, right hemisphere 1.1
2693 Female, age 94, both hemispheres 0.0
Perirhinal gyrus
nTPM: 3.4
1794 Male, age 80, right hemisphere 5.2
1847 Female, age 91, left hemisphere 3.6
2521 Female, age 94, right hemisphere 3.4
2848 Male, age 76, right hemisphere 2.7
1841 Female, age 85, right hemisphere 1.9
Subiculum
nTPM: 6.1
1901 Male, age 80, both hemispheres 9.3
1977 Female, age 85, both hemispheres 7.2
2042 Male, age 76, both hemispheres 7.0
2729 Female, age 91, right hemisphere 6.5
2619 Male, age 74, both hemispheres 3.4
2438 Female, age 94, left hemisphere 3.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.8
Samples: 197

Max nTPM: 23.6
Min nTPM: 1.3
Std nTPM: 4.0
Median nTPM: 7.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 23.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 19.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 17.8
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 16.7
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 15.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 15.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 15.1
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 15.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 14.9
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 14.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 14.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.7
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 26.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 102.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 92.7
Samples: 4

Max nTPM: 100.6
Min nTPM: 88.0
Sample A Male 90.6
Sample B Male 88.0
Sample C Female 91.6
Sample D Female 100.6
Hippocampal formation
nTPM: 102.3
Samples: 4

Max nTPM: 125.9
Min nTPM: 88.7
Sample A Male 91.6
Sample B Male 103.0
Sample C Female 125.9
Sample D Female 88.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
77395095 Antisense, RP_070129_01_D12, Mouse strain C57BL/6J (56 days, male) 9.8
1300 Antisense, RP_Baylor_103382, Mouse strain C57BL/6J (56 days, male) 2.7
1299 Antisense, RP_Baylor_103382, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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