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ARFGAP3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.9 nTPM
HPA:17.9 nTPM
GTEx:15.6 nTPM
FANTOM5:38.9 Scaled Tags Per Million
Pig:12.9 nTPM
Mouse:15.5 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000638
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.9
Sample id Sample description nTPM
Hippocampus
nTPM: 16.5
1911 Female, age 85, right hemisphere 17.5
1898 Male, age 80, left hemisphere 17.3
1855 Male, age 76, left hemisphere 17.0
2148 Female, age 91, left hemisphere 16.1
2621 Female, age 67, right hemisphere 15.9
2529 Female, age 94, left hemisphere 15.5
Dentate gyrus
nTPM: 17.5
2010 Male, age 76, both hemispheres 19.1
1927 Female, age 91, both hemispheres 18.1
2531 Female, age 67, both hemispheres 17.6
2528 Male, age 74, both hemispheres 17.1
2246 Female, age 85, both hemispheres 16.9
2530 Female, age 94, left hemisphere 15.9
Entorhinal gyrus
nTPM: 15.5
2117 Female, age 91, right hemisphere 17.0
1787 Male, age 76, left hemisphere 16.4
1938 Female, age 85, left hemisphere 15.8
2686 Male, age 75, right hemisphere 15.2
2613 Female, age 94, left hemisphere 14.4
2764 Male, age 80, right hemisphere 14.1
Hippocampus, CA1
nTPM: 17.9
2749 Male, age 80, left hemisphere 18.9
1873 Female, age 85, both hemispheres 18.5
2045 Male, age 76, both hemispheres 17.9
2527 Male, age 74, both hemispheres 17.6
2082 Female, age 91, right hemisphere 16.6
Hippocampus, CA2
nTPM: 16.9
1963 Male, age 80, left hemisphere 17.9
1940 Female, age 85, left hemisphere 17.8
2249 Male, age 74, both hemispheres 17.3
2113 Female, age 91, right hemisphere 16.3
1892 Male, age 76, both hemispheres 16.0
2437 Female, age 94, left hemisphere 15.9
Hippocampus, CA3
nTPM: 17.9
2137 Male, age 80, left hemisphere 19.4
2620 Female, age 94, left hemisphere 18.8
1891 Female, age 85, both hemispheres 18.4
2436 Male, age 74, both hemispheres 18.0
1867 Male, age 76, both hemispheres 17.4
2861 Female, age 67, both hemispheres 15.5
Parahippocampal cortex
nTPM: 16.2
2018 Male, age 76, both hemispheres 19.1
2250 Female, age 67, right hemisphere 17.2
2693 Female, age 94, both hemispheres 16.7
1850 Male, age 80, both hemispheres 16.5
1990 Female, age 91, right hemisphere 16.0
1933 Female, age 85, both hemispheres 15.9
2532 Female, age 72, left hemisphere 15.7
2692 Male, age 74, both hemispheres 15.6
2245 Female, age 91, both hemispheres 15.2
2622 Female, age 67, right hemisphere 14.6
Perirhinal gyrus
nTPM: 16.4
2521 Female, age 94, right hemisphere 17.7
1841 Female, age 85, right hemisphere 17.1
1794 Male, age 80, right hemisphere 15.8
1847 Female, age 91, left hemisphere 15.8
2848 Male, age 76, right hemisphere 15.5
Subiculum
nTPM: 16.9
2042 Male, age 76, both hemispheres 19.4
1977 Female, age 85, both hemispheres 17.4
2729 Female, age 91, right hemisphere 17.4
1901 Male, age 80, both hemispheres 17.0
2619 Male, age 74, both hemispheres 15.7
2438 Female, age 94, left hemisphere 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.6
Samples: 197

Max nTPM: 29.8
Min nTPM: 9.6
Std nTPM: 3.2
Median nTPM: 15.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 29.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 26.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 25.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 25.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 24.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 24.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 24.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 22.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 22.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 22.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 22.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.9
FF:10153-102I9 76 years, female 45.4
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.9
Samples: 4

Max nTPM: 15.7
Min nTPM: 11.0
Sample A Female 15.7
Sample B Female 11.5
Sample C Male 13.5
Sample D Male 11.0
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 13.3
Min nTPM: 10.1
Sample A Female 13.3
Sample B Female 11.4
Sample C Male 11.5
Sample D Male 10.1
Subiculum
nTPM: 11.7
Samples: 4

Max nTPM: 14.3
Min nTPM: 10.0
Sample A Female 14.3
Sample B Female 10.0
Sample C Male 10.7
Sample D Male 11.6
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.1
Sample A Female 14.6
Sample B Female 10.1
Sample C Male 15.0
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 16.4
Min nTPM: 14.7
Sample A Male 15.8
Sample B Male 16.4
Sample C Female 14.7
Sample D Female 15.2
Hippocampal formation
nTPM: 14.0
Samples: 4

Max nTPM: 15.1
Min nTPM: 12.6
Sample A Male 15.1
Sample B Male 12.6
Sample C Female 14.7
Sample D Female 13.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
68269273 Antisense, RP_041208_02_A07, Mouse strain C57BL/6J (56 days, male) 4.6

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The Human Protein Atlas

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