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C4orf48
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:49.4 nTPM
HPA:49.4 nTPM
GTEx:115.5 nTPM
FANTOM5:45.5 Scaled Tags Per Million
Pig:19.5 nTPM
Mouse:5.8 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052447
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.4
Sample id Sample description nTPM
Hippocampus
nTPM: 43.1
1898 Male, age 80, left hemisphere 57.8
2621 Female, age 67, right hemisphere 46.9
2529 Female, age 94, left hemisphere 43.2
1911 Female, age 85, right hemisphere 40.5
1855 Male, age 76, left hemisphere 38.5
2148 Female, age 91, left hemisphere 31.5
Dentate gyrus
nTPM: 45.6
2530 Female, age 94, left hemisphere 71.6
2010 Male, age 76, both hemispheres 57.5
1927 Female, age 91, both hemispheres 41.2
2528 Male, age 74, both hemispheres 38.6
2531 Female, age 67, both hemispheres 35.5
2246 Female, age 85, both hemispheres 29.2
Entorhinal gyrus
nTPM: 49.4
2117 Female, age 91, right hemisphere 62.6
2764 Male, age 80, right hemisphere 58.7
2613 Female, age 94, left hemisphere 47.3
1938 Female, age 85, left hemisphere 45.6
1787 Male, age 76, left hemisphere 44.6
2686 Male, age 75, right hemisphere 37.5
Hippocampus, CA1
nTPM: 40.0
2749 Male, age 80, left hemisphere 63.1
2527 Male, age 74, both hemispheres 41.4
2045 Male, age 76, both hemispheres 36.9
1873 Female, age 85, both hemispheres 35.6
2082 Female, age 91, right hemisphere 23.2
Hippocampus, CA2
nTPM: 41.3
1963 Male, age 80, left hemisphere 57.8
2249 Male, age 74, both hemispheres 44.9
2437 Female, age 94, left hemisphere 42.7
1892 Male, age 76, both hemispheres 42.4
1940 Female, age 85, left hemisphere 35.3
2113 Female, age 91, right hemisphere 24.9
Hippocampus, CA3
nTPM: 36.1
2436 Male, age 74, both hemispheres 42.6
2620 Female, age 94, left hemisphere 38.6
1867 Male, age 76, both hemispheres 35.4
1891 Female, age 85, both hemispheres 34.8
2861 Female, age 67, both hemispheres 34.4
2137 Male, age 80, left hemisphere 30.9
Parahippocampal cortex
nTPM: 34.4
1933 Female, age 85, both hemispheres 45.8
1990 Female, age 91, right hemisphere 41.4
2532 Female, age 72, left hemisphere 37.4
2245 Female, age 91, both hemispheres 36.0
2018 Male, age 76, both hemispheres 35.8
2692 Male, age 74, both hemispheres 34.4
1850 Male, age 80, both hemispheres 32.9
2622 Female, age 67, right hemisphere 30.3
2250 Female, age 67, right hemisphere 29.2
2693 Female, age 94, both hemispheres 21.0
Perirhinal gyrus
nTPM: 34.4
1794 Male, age 80, right hemisphere 43.9
2521 Female, age 94, right hemisphere 38.0
1847 Female, age 91, left hemisphere 37.9
1841 Female, age 85, right hemisphere 28.0
2848 Male, age 76, right hemisphere 24.2
Subiculum
nTPM: 42.2
1901 Male, age 80, both hemispheres 51.8
1977 Female, age 85, both hemispheres 50.0
2042 Male, age 76, both hemispheres 47.7
2619 Male, age 74, both hemispheres 45.4
2438 Female, age 94, left hemisphere 30.4
2729 Female, age 91, right hemisphere 28.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 115.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.5
Samples: 197

Max nTPM: 365.1
Min nTPM: 9.2
Std nTPM: 59.8
Median nTPM: 106.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 365.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 344.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 302.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 276.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 259.1
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 256.5
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 244.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 240.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 230.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 228.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 220.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.5
FF:10169-103B7 60 years, female 55.4
FF:10153-102I9 76 years, female 35.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 28.4
Min nTPM: 11.6
Sample A Female 28.4
Sample B Female 17.0
Sample C Male 17.7
Sample D Male 11.6
Entorhinal cortex
nTPM: 17.4
Samples: 4

Max nTPM: 22.7
Min nTPM: 12.7
Sample A Female 15.9
Sample B Female 18.3
Sample C Male 22.7
Sample D Male 12.7
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 29.6
Min nTPM: 12.8
Sample A Female 29.6
Sample B Female 16.9
Sample C Male 15.5
Sample D Male 12.8
Ventral hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 25.0
Min nTPM: 11.9
Sample A Female 23.7
Sample B Female 17.5
Sample C Male 25.0
Sample D Male 11.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 9.6
Min nTPM: 1.6
Sample A Male 9.6
Sample B Male 8.8
Sample C Female 1.6
Sample D Female 3.1
Hippocampal formation
nTPM: 3.3
Samples: 4

Max nTPM: 5.1
Min nTPM: 0.9
Sample A Male 2.6
Sample B Male 5.1
Sample C Female 0.9
Sample D Female 4.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
74581181 Antisense, RP_060215_02_G02, Mouse strain C57BL/6J (56 days, male) 0.5

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