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PCP4L1
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		52.227
RNA expressioni
Consensus:14.1 nTPM
HPA:14.1 nTPM
GTEx:17.4 nTPM
FANTOM5:11.6 Scaled Tags Per Million
Pig:5.4 nTPM
Mouse:98.5 nTPM
Allen mouse:14.9 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA052833
Amygdala mean intensity 52.227
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 27.643
Basal medial amygdaloid nucleus 33.507
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 31.557
Cortical amygdala 30.456
Central amygdala 28.634
Medial amygdaloid nucleus 52.227

AMYGDALA - HPA Brain RNA-seq
Max nTPM 14.1
Sample id Sample description nTPM
Amygdala
nTPM: 6.0
2814 Male, age 76, right hemisphere 8.4
2514 Male, age 75, right hemisphere 6.7
1987 Female, age 91, left hemisphere 5.6
2695 Female, age 67, right hemisphere 5.2
2517 Female, age 94, left hemisphere 4.0
Basal amygdala
nTPM: 4.2
2609 Male, age 75, right hemisphere 6.2
1955 Male, age 76, both hemispheres 5.7
2685 Female, age 94, left hemisphere 4.3
2827 Female, age 67, right hemisphere 3.7
2243 Female, age 91, right hemisphere 3.1
2110 Male, age 80, left hemisphere 2.3
Central amygdala
nTPM: 7.9
1905 Male, age 76, both hemispheres 12.3
2515 Male, age 75, right hemisphere 8.9
2701 Female, age 91, right hemisphere 8.3
2239 Male, age 80, left hemisphere 5.4
2826 Female, age 94, left hemisphere 4.7
Corticomedial amygdala
nTPM: 7.9
2242 Female, age 91, right hemisphere 20.7
2428 Male, age 75, right hemisphere 8.3
2240 Male, age 76, both hemispheres 8.2
2829 Male, age 80, left hemisphere 4.3
2429 Female, age 94, left hemisphere 3.5
2535 Female, age 67, right hemisphere 2.3
Lateral amygdala
nTPM: 4.9
2255 Female, age 91, right hemisphere 7.0
2516 Male, age 75, right hemisphere 6.3
2534 Female, age 94, left hemisphere 4.8
1883 Male, age 76, both hemispheres 4.7
2830 Female, age 67, right hemisphere 3.6
2256 Male, age 80, left hemisphere 3.1
Stria terminalis, bed nucleus
nTPM: 14.1
2486 Female, age 94, both hemispheres 18.9
1974 Female, age 91, both hemispheres 13.3
2201 Male, age 74, unknown 10.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 17.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 17.4
Samples: 152

Max nTPM: 70.1
Min nTPM: 1.1
Std nTPM: 13.2
Median nTPM: 14.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 70.1
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 64.4
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 53.1
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 52.4
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 49.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 48.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 47.9
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 47.7
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 42.7
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 38.5
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 36.8
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 11.6
FF:10151-102I7 76 years, female 11.6

AMYGDALA - Pig RNA-seqi
Average nTPM 5.4
Pig sample Sample description nTPM
Amygdala
nTPM: 5.4
Samples: 4

Max nTPM: 6.7
Min nTPM: 4.6
Sample A Female 6.7
Sample B Female 5.6
Sample C Male 4.8
Sample D Male 4.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 98.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 98.5
Samples: 4

Max nTPM: 144.0
Min nTPM: 72.8
Sample A Male 72.8
Sample B Male 83.3
Sample C Female 144.0
Sample D Female 94.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 14.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 14.9
75084520 Antisense, RP_060412_04_C10, Mouse strain C57BL/6J (56 days, male) 17.3
69782873 Antisense, RP_050505_03_H09, Mouse strain C57BL/6J (56 days, male) 12.6

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.