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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:11.2 nTPM
HPA:11.2 nTPM
GTEx:11.6 nTPM
FANTOM5:16.4 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040513Antibody HPA047173Antibody HPA049270Antibody HPA052278
Glial cells LowLowNot detectedNot detected
Neuronal cells Not detectedMediumNot detectedNot detected








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.2
2529 Female, age 94, left hemisphere 12.5
1898 Male, age 80, left hemisphere 12.1
2621 Female, age 67, right hemisphere 11.7
2148 Female, age 91, left hemisphere 11.3
1855 Male, age 76, left hemisphere 10.7
1911 Female, age 85, right hemisphere 8.9
Dentate gyrus
nTPM: 10.9
2530 Female, age 94, left hemisphere 12.1
2010 Male, age 76, both hemispheres 11.9
2528 Male, age 74, both hemispheres 11.4
2246 Female, age 85, both hemispheres 10.7
1927 Female, age 91, both hemispheres 10.0
2531 Female, age 67, both hemispheres 9.5
Entorhinal gyrus
nTPM: 11.2
2764 Male, age 80, right hemisphere 12.3
2117 Female, age 91, right hemisphere 12.2
1787 Male, age 76, left hemisphere 11.2
1938 Female, age 85, left hemisphere 10.8
2613 Female, age 94, left hemisphere 10.5
2686 Male, age 75, right hemisphere 10.1
Hippocampus, CA1
nTPM: 11.0
2749 Male, age 80, left hemisphere 12.4
2527 Male, age 74, both hemispheres 11.8
2082 Female, age 91, right hemisphere 10.9
1873 Female, age 85, both hemispheres 10.4
2045 Male, age 76, both hemispheres 9.4
Hippocampus, CA2
nTPM: 11.2
1963 Male, age 80, left hemisphere 12.5
2249 Male, age 74, both hemispheres 12.0
1892 Male, age 76, both hemispheres 11.5
2437 Female, age 94, left hemisphere 11.0
2113 Female, age 91, right hemisphere 10.6
1940 Female, age 85, left hemisphere 9.3
Hippocampus, CA3
nTPM: 10.1
2137 Male, age 80, left hemisphere 10.8
2861 Female, age 67, both hemispheres 10.6
1867 Male, age 76, both hemispheres 10.5
2620 Female, age 94, left hemisphere 9.8
2436 Male, age 74, both hemispheres 9.7
1891 Female, age 85, both hemispheres 9.1
Parahippocampal cortex
nTPM: 10.8
1933 Female, age 85, both hemispheres 11.8
2245 Female, age 91, both hemispheres 11.4
2250 Female, age 67, right hemisphere 11.4
2692 Male, age 74, both hemispheres 11.3
1990 Female, age 91, right hemisphere 11.2
2532 Female, age 72, left hemisphere 11.1
1850 Male, age 80, both hemispheres 10.7
2018 Male, age 76, both hemispheres 10.3
2622 Female, age 67, right hemisphere 9.9
2693 Female, age 94, both hemispheres 9.2
Perirhinal gyrus
nTPM: 11.1
1794 Male, age 80, right hemisphere 12.4
1847 Female, age 91, left hemisphere 12.2
1841 Female, age 85, right hemisphere 10.7
2521 Female, age 94, right hemisphere 10.5
2848 Male, age 76, right hemisphere 9.7
Subiculum
nTPM: 10.8
2619 Male, age 74, both hemispheres 12.1
1977 Female, age 85, both hemispheres 11.1
2729 Female, age 91, right hemisphere 11.1
1901 Male, age 80, both hemispheres 10.5
2438 Female, age 94, left hemisphere 10.4
2042 Male, age 76, both hemispheres 9.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.6
Samples: 197

Max nTPM: 20.8
Min nTPM: 3.7
Std nTPM: 3.1
Median nTPM: 11.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 18.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 18.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 18.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 18.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 18.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 18.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 17.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 17.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 17.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 16.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.4
FF:10153-102I9 76 years, female 19.3
FF:10169-103B7 60 years, female 13.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.