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GLI4
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:8.2 nTPM
HPA:8.2 nTPM
GTEx:22.7 nTPM
FANTOM5:8.6 Scaled Tags Per Million
Pig:16.6 nTPM

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi
Antibody HPA023131
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 8.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 6.8
2289 Male, age 61, right hemisphere 9.1
2288 Male, age 75, left hemisphere 7.5
2290 Female, age 72, unknown 7.2
1781 Male, age 74, unknown 6.6
2846 Female, age 79, unknown 6.5
1857 Female, age 85, left hemisphere 6.3
1854 Male, age 80, left hemisphere 5.9
2481 Female, age 94, left hemisphere 5.1
Claustrum
nTPM: 8.2
2645 Female, age 72, unknown 14.0
2568 Male, age 61, both hemispheres 10.5
2284 Female, age 91, both hemispheres 9.5
2198 Male, age 80, both hemispheres 7.8
2292 Female, age 85, both hemispheres 7.8
2196 Female, age 79, unknown 6.9
1956 Male, age 74, unknown 6.1
2392 Female, age 94, both hemispheres 5.7
2491 Male, age 75, both hemispheres 5.5
Globus pallidus, externus
nTPM: 6.8
2567 Female, age 72, unknown 10.4
2646 Male, age 61, right hemisphere 9.0
2772 Female, age 79, unknown 5.4
1996 Male, age 80, right hemisphere 5.0
2395 Male, age 75, both hemispheres 4.2
Globus pallidus, internus
nTPM: 5.9
2566 Female, age 72, unknown 8.3
1818 Male, age 74, unknown 7.3
2037 Male, age 80, right hemisphere 6.4
2111 Female, age 85, right hemisphere 5.7
2778 Female, age 91, both hemispheres 5.2
2483 Female, age 94, right hemisphere 4.4
2287 Male, age 75, right hemisphere 4.1
Nucleus accumbens
nTPM: 6.5
1806 Female, age 85, left hemisphere 8.0
2824 Male, age 61, right hemisphere 7.2
1783 Male, age 74, unknown 6.9
2698 Female, age 72, unknown 6.7
2732 Male, age 80, right hemisphere 6.5
1856 Female, age 91, right hemisphere 6.3
2391 Female, age 94, left hemisphere 5.3
2286 Male, age 75, left hemisphere 5.0
Nucleus basalis of Meynert
nTPM: 6.8
2569 Male, age 61, both hemispheres 8.0
2821 Male, age 75, both hemispheres 6.9
2484 Female, age 94, left hemisphere 6.2
2393 Male, age 80, right hemisphere 6.0
Nucleus of the diagonal band
nTPM: 6.0
1979 Male, age 74, unknown 7.3
2195 Female, age 85, both hemispheres 7.1
2775 Male, age 80, right hemisphere 5.5
2029 Male, age 61, right hemisphere 5.4
1812 Female, age 91, both hemispheres 4.5
Olfactory tubercle
nTPM: 6.6
1998 Female, age 91, both hemispheres 7.3
2856 Male, age 75, right hemisphere 7.3
2487 Female, age 94, left hemisphere 6.8
1846 Male, age 80, right hemisphere 4.8
Putamen
nTPM: 6.7
2489 Female, age 72, unknown 8.4
2647 Male, age 75, left hemisphere 8.1
2466 Female, age 79, unknown 6.5
2482 Female, age 94, left hemisphere 6.3
1829 Male, age 74, unknown 6.1
1838 Male, age 80, right hemisphere 5.9
1937 Female, age 91, right hemisphere 5.7
Septal nuclei
nTPM: 6.1
2629 Female, age 94, right hemisphere 8.5
2059 Female, age 85, both hemispheres 7.1
2394 Male, age 61, left hemisphere 6.2
1960 Male, age 74, unknown 5.8
2199 Male, age 80, right hemisphere 5.5
2009 Female, age 91, both hemispheres 4.9
2031 Female, age 72, unknown 4.7

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 22.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 19.5
Samples: 246

Max nTPM: 36.4
Min nTPM: 7.2
Std nTPM: 5.5
Median nTPM: 18.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 36.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 34.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 33.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 32.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 32.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 32.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 31.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 31.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 31.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 30.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 30.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 22.7
Samples: 246

Max nTPM: 62.7
Min nTPM: 5.3
Std nTPM: 8.6
Median nTPM: 21.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 62.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 52.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 49.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 44.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 43.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 43.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 42.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 41.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 41.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 41.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 40.4
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Brain - Putamen (basal ganglia)
Average nTPM: 22.2
Samples: 205

Max nTPM: 43.6
Min nTPM: 6.3
Std nTPM: 6.6
Median nTPM: 21.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 43.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 41.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 40.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 39.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 38.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 35.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 35.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 35.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 35.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 34.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 34.6
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 7.7
FF:10164-103B2 76 years, female 7.7
Globus pallidus
Scaled Tags Per Million: 8.6
FF:10175-103C4 60 years, female 11.0
FF:10161-103A8 76 years, female 6.3
Nucleus accumbens
Scaled Tags Per Million: 6.6
FF:10037-101F1 23-56 years, mixed 6.6
Putamen
Scaled Tags Per Million: 6.9
FF:10176-103C5 60 years, female 6.9

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 16.6
Pig sample Sample description nTPM
Caudate
nTPM: 16.6
Samples: 4

Max nTPM: 22.1
Min nTPM: 12.1
Sample A Female 12.1
Sample B Female 16.8
Sample C Male 22.1
Sample D Male 15.5
Putamen
nTPM: 14.8
Samples: 4

Max nTPM: 18.5
Min nTPM: 10.4
Sample A Female 10.4
Sample B Female 13.6
Sample C Male 18.5
Sample D Male 16.6
Septum
nTPM: 10.6
Samples: 4

Max nTPM: 13.0
Min nTPM: 7.7
Sample A Female 10.9
Sample B Female 10.9
Sample C Male 13.0
Sample D Male 7.7
Ventral pallidum
nTPM: 12.4
Samples: 4

Max nTPM: 15.3
Min nTPM: 10.5
Sample A Female 10.5
Sample B Female 12.0
Sample C Male 15.3
Sample D Male 11.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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