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FXYD6-FXYD2
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:0.4 nTPM
HPA:0.4 nTPM
GTEx:0.1 nTPM
FANTOM5:343.4 Scaled Tags Per Million

CAUDATE - Antibody stainingi
Antibody HPA068838
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 0.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.2
1781 Male, age 74, unknown 0.4
1854 Male, age 80, left hemisphere 0.3
2846 Female, age 79, unknown 0.3
1857 Female, age 85, left hemisphere 0.2
2288 Male, age 75, left hemisphere 0.2
2289 Male, age 61, right hemisphere 0.2
2290 Female, age 72, unknown 0.2
2481 Female, age 94, left hemisphere 0.2
Claustrum
nTPM: 0.4
2491 Male, age 75, both hemispheres 0.7
2568 Male, age 61, both hemispheres 0.6
2645 Female, age 72, unknown 0.5
2198 Male, age 80, both hemispheres 0.4
2284 Female, age 91, both hemispheres 0.4
1956 Male, age 74, unknown 0.3
2196 Female, age 79, unknown 0.3
2392 Female, age 94, both hemispheres 0.3
2292 Female, age 85, both hemispheres 0.2
Globus pallidus, externus
nTPM: 0.2
2567 Female, age 72, unknown 0.3
1996 Male, age 80, right hemisphere 0.2
2395 Male, age 75, both hemispheres 0.2
2646 Male, age 61, right hemisphere 0.2
2772 Female, age 79, unknown 0.2
Globus pallidus, internus
nTPM: 0.2
2778 Female, age 91, both hemispheres 0.3
1818 Male, age 74, unknown 0.2
2287 Male, age 75, right hemisphere 0.2
2483 Female, age 94, right hemisphere 0.2
2566 Female, age 72, unknown 0.2
2037 Male, age 80, right hemisphere 0.1
2111 Female, age 85, right hemisphere 0.1
Nucleus accumbens
nTPM: 0.2
1856 Female, age 91, right hemisphere 0.3
1783 Male, age 74, unknown 0.2
2286 Male, age 75, left hemisphere 0.2
2391 Female, age 94, left hemisphere 0.2
2698 Female, age 72, unknown 0.2
2732 Male, age 80, right hemisphere 0.2
2824 Male, age 61, right hemisphere 0.2
1806 Female, age 85, left hemisphere 0.1
Nucleus basalis of Meynert
nTPM: 0.2
2393 Male, age 80, right hemisphere 0.2
2484 Female, age 94, left hemisphere 0.2
2569 Male, age 61, both hemispheres 0.2
2821 Male, age 75, both hemispheres 0.2
Nucleus of the diagonal band
nTPM: 0.4
2029 Male, age 61, right hemisphere 0.5
2195 Female, age 85, both hemispheres 0.5
1812 Female, age 91, both hemispheres 0.3
2775 Male, age 80, right hemisphere 0.3
1979 Male, age 74, unknown 0.2
Olfactory tubercle
nTPM: 0.4
1846 Male, age 80, right hemisphere 0.4
2487 Female, age 94, left hemisphere 0.4
2856 Male, age 75, right hemisphere 0.4
1998 Female, age 91, both hemispheres 0.3
Putamen
nTPM: 0.2
1838 Male, age 80, right hemisphere 0.3
1829 Male, age 74, unknown 0.2
2466 Female, age 79, unknown 0.2
2482 Female, age 94, left hemisphere 0.2
2489 Female, age 72, unknown 0.2
2647 Male, age 75, left hemisphere 0.2
1937 Female, age 91, right hemisphere 0.1
Septal nuclei
nTPM: 0.3
2059 Female, age 85, both hemispheres 0.5
2009 Female, age 91, both hemispheres 0.4
2629 Female, age 94, right hemisphere 0.4
2031 Female, age 72, unknown 0.3
2394 Male, age 61, left hemisphere 0.3
1960 Male, age 74, unknown 0.2
2199 Male, age 80, right hemisphere 0.2

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 0.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.1
Samples: 246

Max nTPM: 0.9
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM:
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 0.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 0.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 0.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 0.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 0.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 0.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 0.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 0.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 0.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 0.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 0.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.1
Samples: 246

Max nTPM: 3.0
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM: 0.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 3.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 0.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 0.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 0.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 0.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 0.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 0.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 0.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 0.6
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Brain - Putamen (basal ganglia)
Average nTPM: 0.0
Samples: 205

Max nTPM: 1.1
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 0.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 0.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 0.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 0.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 0.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 0.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 0.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 0.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 0.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 0.4
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 343.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 98.5
FF:10164-103B2 76 years, female 98.5
Globus pallidus
Scaled Tags Per Million: 51.7
FF:10175-103C4 60 years, female 59.9
FF:10161-103A8 76 years, female 43.5
Nucleus accumbens
Scaled Tags Per Million: 343.4
FF:10037-101F1 23-56 years, mixed 343.4
Putamen
Scaled Tags Per Million: 112.4
FF:10176-103C5 60 years, female 112.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.