ABOUTMENU
HELP
NEWS
C11orf97
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:2.6 nTPM
HPA:2.6 nTPM
GTEx:10.4 nTPM
FANTOM5:41.1 Scaled Tags Per Million
Pig:5.7 nTPM
Mouse:10.3 nTPM
Allen mouse:0.1 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 2.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 1.8
1857 Female, age 85, left hemisphere 3.7
1854 Male, age 80, left hemisphere 2.6
2290 Female, age 72, unknown 2.5
1781 Male, age 74, unknown 1.9
2846 Female, age 79, unknown 1.4
2289 Male, age 61, right hemisphere 1.0
2481 Female, age 94, left hemisphere 0.7
2288 Male, age 75, left hemisphere 0.4
Claustrum
nTPM: 0.8
2196 Female, age 79, unknown 2.1
2491 Male, age 75, both hemispheres 1.2
2392 Female, age 94, both hemispheres 0.7
2198 Male, age 80, both hemispheres 0.6
2284 Female, age 91, both hemispheres 0.6
1956 Male, age 74, unknown 0.5
2568 Male, age 61, both hemispheres 0.5
2645 Female, age 72, unknown 0.5
2292 Female, age 85, both hemispheres 0.3
Globus pallidus, externus
nTPM: 0.2
1996 Male, age 80, right hemisphere 0.4
2395 Male, age 75, both hemispheres 0.3
2567 Female, age 72, unknown 0.3
2772 Female, age 79, unknown 0.3
2646 Male, age 61, right hemisphere 0.0
Globus pallidus, internus
nTPM: 0.3
2483 Female, age 94, right hemisphere 0.6
1818 Male, age 74, unknown 0.4
2287 Male, age 75, right hemisphere 0.3
2566 Female, age 72, unknown 0.3
2037 Male, age 80, right hemisphere 0.1
2778 Female, age 91, both hemispheres 0.1
2111 Female, age 85, right hemisphere 0.0
Nucleus accumbens
nTPM: 2.6
1783 Male, age 74, unknown 4.1
2824 Male, age 61, right hemisphere 3.8
1856 Female, age 91, right hemisphere 3.4
1806 Female, age 85, left hemisphere 3.2
2698 Female, age 72, unknown 3.1
2732 Male, age 80, right hemisphere 2.4
2286 Male, age 75, left hemisphere 0.8
2391 Female, age 94, left hemisphere 0.3
Nucleus basalis of Meynert
nTPM: 0.4
2393 Male, age 80, right hemisphere 0.7
2484 Female, age 94, left hemisphere 0.5
2821 Male, age 75, both hemispheres 0.4
2569 Male, age 61, both hemispheres 0.0
Nucleus of the diagonal band
nTPM: 1.7
2195 Female, age 85, both hemispheres 2.1
2775 Male, age 80, right hemisphere 2.0
1812 Female, age 91, both hemispheres 1.8
1979 Male, age 74, unknown 1.6
2029 Male, age 61, right hemisphere 0.9
Olfactory tubercle
nTPM: 1.2
2487 Female, age 94, left hemisphere 1.9
2856 Male, age 75, right hemisphere 1.2
1998 Female, age 91, both hemispheres 1.0
1846 Male, age 80, right hemisphere 0.7
Putamen
nTPM: 1.0
1838 Male, age 80, right hemisphere 2.7
1937 Female, age 91, right hemisphere 1.8
1829 Male, age 74, unknown 0.8
2466 Female, age 79, unknown 0.7
2647 Male, age 75, left hemisphere 0.4
2482 Female, age 94, left hemisphere 0.3
2489 Female, age 72, unknown 0.0
Septal nuclei
nTPM: 1.6
2629 Female, age 94, right hemisphere 2.8
2009 Female, age 91, both hemispheres 2.0
2199 Male, age 80, right hemisphere 1.7
2059 Female, age 85, both hemispheres 1.4
1960 Male, age 74, unknown 1.3
2031 Female, age 72, unknown 1.1
2394 Male, age 61, left hemisphere 0.6

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 4.5
Samples: 246

Max nTPM: 30.6
Min nTPM: 0.0
Std nTPM: 4.1
Median nTPM: 3.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 30.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 19.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 18.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 17.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 17.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 15.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 15.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 15.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 14.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 13.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 13.7
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 10.4
Samples: 246

Max nTPM: 29.9
Min nTPM: 0.0
Std nTPM: 5.9
Median nTPM: 9.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 29.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 28.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 24.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 24.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 24.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 23.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 23.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 22.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 22.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 22.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 22.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 2.6
Samples: 205

Max nTPM: 18.3
Min nTPM: 0.0
Std nTPM: 3.2
Median nTPM: 1.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 18.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 15.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 14.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 13.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 13.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 12.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 12.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 11.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 10.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 10.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 10.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 31.2
FF:10164-103B2 76 years, female 31.2
Globus pallidus
Scaled Tags Per Million: 5.5
FF:10175-103C4 60 years, female 9.4
FF:10161-103A8 76 years, female 1.6
Nucleus accumbens
Scaled Tags Per Million: 13.2
FF:10037-101F1 23-56 years, mixed 13.2
Putamen
Scaled Tags Per Million: 41.1
FF:10176-103C5 60 years, female 41.1

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 5.7
Pig sample Sample description nTPM
Caudate
nTPM: 5.1
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.1
Sample A Female 6.5
Sample B Female 4.5
Sample C Male 5.2
Sample D Male 4.1
Putamen
nTPM: 3.1
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.5
Sample A Female 3.3
Sample B Female 3.2
Sample C Male 3.3
Sample D Male 2.5
Septum
nTPM: 5.7
Samples: 4

Max nTPM: 6.7
Min nTPM: 4.4
Sample A Female 6.7
Sample B Female 5.1
Sample C Male 4.4
Sample D Male 6.7
Ventral pallidum
nTPM: 4.6
Samples: 4

Max nTPM: 7.9
Min nTPM: 2.7
Sample A Female 7.9
Sample B Female 3.8
Sample C Male 2.7
Sample D Male 3.8

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 10.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2.4
Samples: 4

Max nTPM: 2.7
Min nTPM: 2.0
Sample A Male 2.7
Sample B Male 2.7
Sample C Female 2.0
Sample D Female 2.0
Septum
nTPM: 10.4
Samples: 4

Max nTPM: 13.9
Min nTPM: 6.4
Sample A Male 6.4
Sample B Male 12.0
Sample C Female 13.9
Sample D Female 9.1
Ventral forebrain
nTPM: 0.5
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.3
Sample A Male 0.3
Sample B Male 0.8
Sample C Female 0.4
Sample D Female 0.3

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
70723626 Antisense, RP_050705_01_E02, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.0
70723626 Antisense, RP_050705_01_E02, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.