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CTXND1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:30.9 nTPM
HPA:30.9 nTPM
GTEx:26.9 nTPM
FANTOM5:59.6 Scaled Tags Per Million
Mouse:35.0 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.9
Sample id Sample description nTPM
Hippocampus
nTPM: 19.3
1911 Female, age 85, right hemisphere 27.5
1898 Male, age 80, left hemisphere 20.6
2621 Female, age 67, right hemisphere 20.3
1855 Male, age 76, left hemisphere 19.3
2529 Female, age 94, left hemisphere 14.2
2148 Female, age 91, left hemisphere 13.8
Dentate gyrus
nTPM: 13.3
1927 Female, age 91, both hemispheres 21.1
2010 Male, age 76, both hemispheres 20.9
2246 Female, age 85, both hemispheres 13.8
2530 Female, age 94, left hemisphere 8.8
2528 Male, age 74, both hemispheres 8.7
2531 Female, age 67, both hemispheres 6.5
Entorhinal gyrus
nTPM: 7.5
2117 Female, age 91, right hemisphere 11.0
1938 Female, age 85, left hemisphere 8.6
2686 Male, age 75, right hemisphere 6.9
2613 Female, age 94, left hemisphere 6.4
1787 Male, age 76, left hemisphere 6.2
2764 Male, age 80, right hemisphere 6.0
Hippocampus, CA1
nTPM: 30.6
2749 Male, age 80, left hemisphere 92.1
2527 Male, age 74, both hemispheres 23.0
1873 Female, age 85, both hemispheres 16.3
2082 Female, age 91, right hemisphere 13.3
2045 Male, age 76, both hemispheres 8.2
Hippocampus, CA2
nTPM: 18.5
1963 Male, age 80, left hemisphere 30.8
1892 Male, age 76, both hemispheres 25.5
2249 Male, age 74, both hemispheres 17.6
2113 Female, age 91, right hemisphere 16.2
2437 Female, age 94, left hemisphere 10.5
1940 Female, age 85, left hemisphere 10.4
Hippocampus, CA3
nTPM: 30.9
2137 Male, age 80, left hemisphere 109.4
1867 Male, age 76, both hemispheres 26.7
1891 Female, age 85, both hemispheres 17.5
2436 Male, age 74, both hemispheres 16.3
2861 Female, age 67, both hemispheres 9.7
2620 Female, age 94, left hemisphere 6.0
Parahippocampal cortex
nTPM: 10.6
2245 Female, age 91, both hemispheres 24.9
2250 Female, age 67, right hemisphere 14.1
2018 Male, age 76, both hemispheres 13.6
2692 Male, age 74, both hemispheres 10.2
1933 Female, age 85, both hemispheres 9.4
2622 Female, age 67, right hemisphere 7.9
1990 Female, age 91, right hemisphere 7.4
2693 Female, age 94, both hemispheres 6.8
1850 Male, age 80, both hemispheres 6.4
2532 Female, age 72, left hemisphere 5.7
Perirhinal gyrus
nTPM: 6.9
1847 Female, age 91, left hemisphere 8.5
2521 Female, age 94, right hemisphere 7.5
1794 Male, age 80, right hemisphere 6.9
1841 Female, age 85, right hemisphere 5.9
2848 Male, age 76, right hemisphere 5.8
Subiculum
nTPM: 21.8
1901 Male, age 80, both hemispheres 54.4
2042 Male, age 76, both hemispheres 28.1
2438 Female, age 94, left hemisphere 14.3
2619 Male, age 74, both hemispheres 13.0
2729 Female, age 91, right hemisphere 10.9
1977 Female, age 85, both hemispheres 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.9
Samples: 197

Max nTPM: 136.9
Min nTPM: 2.0
Std nTPM: 24.5
Median nTPM: 17.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 136.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 119.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 108.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 98.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 98.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 93.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 87.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 86.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 82.1
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 81.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 80.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.6
FF:10169-103B7 60 years, female 63.8
FF:10153-102I9 76 years, female 55.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 14.8
Min nTPM: 3.0
Sample A Male 10.1
Sample B Male 3.3
Sample C Female 14.8
Sample D Female 3.0
Hippocampal formation
nTPM: 35.0
Samples: 4

Max nTPM: 41.2
Min nTPM: 28.0
Sample A Male 29.8
Sample B Male 41.2
Sample C Female 41.1
Sample D Female 28.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.