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PMF1-BGLAP
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.8 nTPM
HPA:6.8 nTPM
GTEx:9.0 nTPM
FANTOM5:44.9 Scaled Tags Per Million
Pig:16.6 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 6.8
Sample id Sample description nTPM
Hippocampus
nTPM: 6.4
2621 Female, age 67, right hemisphere 7.5
2148 Female, age 91, left hemisphere 6.8
1911 Female, age 85, right hemisphere 6.2
2529 Female, age 94, left hemisphere 6.1
1855 Male, age 76, left hemisphere 6.0
1898 Male, age 80, left hemisphere 5.9
Dentate gyrus
nTPM: 6.4
2531 Female, age 67, both hemispheres 6.9
2528 Male, age 74, both hemispheres 6.6
1927 Female, age 91, both hemispheres 6.5
2010 Male, age 76, both hemispheres 6.4
2530 Female, age 94, left hemisphere 6.2
2246 Female, age 85, both hemispheres 5.9
Entorhinal gyrus
nTPM: 6.8
2613 Female, age 94, left hemisphere 7.6
2686 Male, age 75, right hemisphere 7.3
2764 Male, age 80, right hemisphere 6.9
1787 Male, age 76, left hemisphere 6.7
1938 Female, age 85, left hemisphere 6.3
2117 Female, age 91, right hemisphere 5.8
Hippocampus, CA1
nTPM: 6.4
2749 Male, age 80, left hemisphere 6.9
2527 Male, age 74, both hemispheres 6.6
2082 Female, age 91, right hemisphere 6.5
2045 Male, age 76, both hemispheres 6.0
1873 Female, age 85, both hemispheres 5.7
Hippocampus, CA2
nTPM: 6.1
1940 Female, age 85, left hemisphere 6.7
2249 Male, age 74, both hemispheres 6.6
2113 Female, age 91, right hemisphere 6.2
1892 Male, age 76, both hemispheres 6.0
1963 Male, age 80, left hemisphere 5.7
2437 Female, age 94, left hemisphere 5.4
Hippocampus, CA3
nTPM: 6.8
2620 Female, age 94, left hemisphere 8.5
2436 Male, age 74, both hemispheres 7.0
2137 Male, age 80, left hemisphere 6.8
2861 Female, age 67, both hemispheres 6.4
1867 Male, age 76, both hemispheres 6.2
1891 Female, age 85, both hemispheres 6.2
Parahippocampal cortex
nTPM: 6.1
1990 Female, age 91, right hemisphere 7.1
2692 Male, age 74, both hemispheres 6.6
1933 Female, age 85, both hemispheres 6.3
2250 Female, age 67, right hemisphere 6.3
1850 Male, age 80, both hemispheres 6.2
2018 Male, age 76, both hemispheres 6.1
2622 Female, age 67, right hemisphere 6.1
2693 Female, age 94, both hemispheres 6.1
2245 Female, age 91, both hemispheres 5.4
2532 Female, age 72, left hemisphere 5.1
Perirhinal gyrus
nTPM: 6.1
1794 Male, age 80, right hemisphere 6.8
1847 Female, age 91, left hemisphere 6.4
2848 Male, age 76, right hemisphere 6.2
1841 Female, age 85, right hemisphere 5.4
2521 Female, age 94, right hemisphere 5.4
Subiculum
nTPM: 6.1
2619 Male, age 74, both hemispheres 7.3
1977 Female, age 85, both hemispheres 6.6
1901 Male, age 80, both hemispheres 6.1
2729 Female, age 91, right hemisphere 6.0
2042 Male, age 76, both hemispheres 5.7
2438 Female, age 94, left hemisphere 4.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.0
Samples: 197

Max nTPM: 38.7
Min nTPM: 2.8
Std nTPM: 4.1
Median nTPM: 8.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 38.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 23.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 19.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 19.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 19.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 18.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 17.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 17.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 16.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 16.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 15.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.9
FF:10153-102I9 76 years, female 49.0
FF:10169-103B7 60 years, female 40.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 17.4
Min nTPM: 13.7
Sample A Female 17.4
Sample B Female 16.3
Sample C Male 16.5
Sample D Male 13.7
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 18.4
Min nTPM: 15.4
Sample A Female 17.1
Sample B Female 15.4
Sample C Male 15.6
Sample D Male 18.4
Subiculum
nTPM: 16.5
Samples: 4

Max nTPM: 18.4
Min nTPM: 15.5
Sample A Female 18.4
Sample B Female 15.8
Sample C Male 16.3
Sample D Male 15.5
Ventral hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 20.2
Min nTPM: 11.5
Sample A Female 16.0
Sample B Female 11.5
Sample C Male 20.2
Sample D Male 16.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.