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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:21.6 nTPM
HPA:21.6 nTPM
GTEx:10.7 nTPM
FANTOM5:17.2 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:22.8 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043253Antibody HPA047809
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.6
Sample id Sample description nTPM
Hippocampus
nTPM: 21.1
1855 Male, age 76, left hemisphere 21.6
2621 Female, age 67, right hemisphere 21.3
2148 Female, age 91, left hemisphere 21.1
1898 Male, age 80, left hemisphere 20.8
1911 Female, age 85, right hemisphere 20.8
2529 Female, age 94, left hemisphere 20.7
Dentate gyrus
nTPM: 21.0
2530 Female, age 94, left hemisphere 22.2
2531 Female, age 67, both hemispheres 21.6
1927 Female, age 91, both hemispheres 21.0
2246 Female, age 85, both hemispheres 20.8
2010 Male, age 76, both hemispheres 20.3
2528 Male, age 74, both hemispheres 20.3
Entorhinal gyrus
nTPM: 21.2
2764 Male, age 80, right hemisphere 22.4
2686 Male, age 75, right hemisphere 21.8
1787 Male, age 76, left hemisphere 21.5
2613 Female, age 94, left hemisphere 20.8
1938 Female, age 85, left hemisphere 20.6
2117 Female, age 91, right hemisphere 20.3
Hippocampus, CA1
nTPM: 21.1
2527 Male, age 74, both hemispheres 21.8
2749 Male, age 80, left hemisphere 21.6
1873 Female, age 85, both hemispheres 21.5
2082 Female, age 91, right hemisphere 20.6
2045 Male, age 76, both hemispheres 20.3
Hippocampus, CA2
nTPM: 20.5
1892 Male, age 76, both hemispheres 21.0
1963 Male, age 80, left hemisphere 20.8
1940 Female, age 85, left hemisphere 20.4
2249 Male, age 74, both hemispheres 20.4
2113 Female, age 91, right hemisphere 20.3
2437 Female, age 94, left hemisphere 19.9
Hippocampus, CA3
nTPM: 21.1
2620 Female, age 94, left hemisphere 22.1
1867 Male, age 76, both hemispheres 21.3
2137 Male, age 80, left hemisphere 21.3
2436 Male, age 74, both hemispheres 21.2
2861 Female, age 67, both hemispheres 21.0
1891 Female, age 85, both hemispheres 19.6
Parahippocampal cortex
nTPM: 21.1
2532 Female, age 72, left hemisphere 22.5
1850 Male, age 80, both hemispheres 21.9
2622 Female, age 67, right hemisphere 21.7
2245 Female, age 91, both hemispheres 21.2
2250 Female, age 67, right hemisphere 21.0
2018 Male, age 76, both hemispheres 20.9
2692 Male, age 74, both hemispheres 20.9
2693 Female, age 94, both hemispheres 20.9
1933 Female, age 85, both hemispheres 20.3
1990 Female, age 91, right hemisphere 20.1
Perirhinal gyrus
nTPM: 21.6
1841 Female, age 85, right hemisphere 22.0
1794 Male, age 80, right hemisphere 21.7
2521 Female, age 94, right hemisphere 21.7
1847 Female, age 91, left hemisphere 21.5
2848 Male, age 76, right hemisphere 21.1
Subiculum
nTPM: 20.9
2619 Male, age 74, both hemispheres 22.8
2438 Female, age 94, left hemisphere 21.7
1977 Female, age 85, both hemispheres 21.2
1901 Male, age 80, both hemispheres 20.6
2042 Male, age 76, both hemispheres 19.9
2729 Female, age 91, right hemisphere 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.7
Samples: 197

Max nTPM: 20.6
Min nTPM: 3.8
Std nTPM: 3.0
Median nTPM: 10.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 20.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 18.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 18.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 18.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 17.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 17.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 17.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 16.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 16.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 16.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.2
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 22.5
Min nTPM: 13.8
Sample A Female 22.5
Sample B Female 14.3
Sample C Male 19.2
Sample D Male 13.8
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 16.2
Min nTPM: 13.1
Sample A Female 16.2
Sample B Female 16.2
Sample C Male 13.1
Sample D Male 14.8
Subiculum
nTPM: 15.4
Samples: 4

Max nTPM: 19.3
Min nTPM: 13.5
Sample A Female 19.3
Sample B Female 13.5
Sample C Male 15.1
Sample D Male 13.6
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 21.0
Min nTPM: 10.8
Sample A Female 21.0
Sample B Female 10.8
Sample C Male 19.6
Sample D Male 16.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 24.1
Min nTPM: 19.3
Sample A Male 19.3
Sample B Male 24.1
Sample C Female 20.2
Sample D Female 19.6
Hippocampal formation
nTPM: 22.8
Samples: 4

Max nTPM: 25.4
Min nTPM: 20.8
Sample A Male 22.8
Sample B Male 22.3
Sample C Female 20.8
Sample D Female 25.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
393212 Antisense, RP_040804_02_D12, Mouse strain C57BL/6J (56 days, male) 5.0

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