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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:64.9 nTPM
HPA:64.9 nTPM
GTEx:24.6 nTPM
FANTOM5:249.6 Scaled Tags Per Million
Mouse:199.2 nTPM
Allen mouse:17.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055953
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.9
Sample id Sample description nTPM
Hippocampus
nTPM: 56.8
1898 Male, age 80, left hemisphere 62.1
2529 Female, age 94, left hemisphere 59.6
2148 Female, age 91, left hemisphere 59.5
2621 Female, age 67, right hemisphere 56.4
1855 Male, age 76, left hemisphere 55.3
1911 Female, age 85, right hemisphere 48.1
Dentate gyrus
nTPM: 56.1
2530 Female, age 94, left hemisphere 67.4
1927 Female, age 91, both hemispheres 63.1
2246 Female, age 85, both hemispheres 54.4
2010 Male, age 76, both hemispheres 51.9
2531 Female, age 67, both hemispheres 51.6
2528 Male, age 74, both hemispheres 48.2
Entorhinal gyrus
nTPM: 62.8
2686 Male, age 75, right hemisphere 73.5
1938 Female, age 85, left hemisphere 67.4
2117 Female, age 91, right hemisphere 61.4
2764 Male, age 80, right hemisphere 59.8
1787 Male, age 76, left hemisphere 57.7
2613 Female, age 94, left hemisphere 56.9
Hippocampus, CA1
nTPM: 58.1
2749 Male, age 80, left hemisphere 70.9
2527 Male, age 74, both hemispheres 58.1
1873 Female, age 85, both hemispheres 56.6
2082 Female, age 91, right hemisphere 52.8
2045 Male, age 76, both hemispheres 52.2
Hippocampus, CA2
nTPM: 58.8
1963 Male, age 80, left hemisphere 71.0
1892 Male, age 76, both hemispheres 64.7
2113 Female, age 91, right hemisphere 57.3
2437 Female, age 94, left hemisphere 57.0
1940 Female, age 85, left hemisphere 53.1
2249 Male, age 74, both hemispheres 49.7
Hippocampus, CA3
nTPM: 52.8
2137 Male, age 80, left hemisphere 66.1
2861 Female, age 67, both hemispheres 54.7
1867 Male, age 76, both hemispheres 54.2
1891 Female, age 85, both hemispheres 53.3
2436 Male, age 74, both hemispheres 44.2
2620 Female, age 94, left hemisphere 44.2
Parahippocampal cortex
nTPM: 60.4
1850 Male, age 80, both hemispheres 67.3
2692 Male, age 74, both hemispheres 65.3
1990 Female, age 91, right hemisphere 65.0
2250 Female, age 67, right hemisphere 65.0
2245 Female, age 91, both hemispheres 63.8
1933 Female, age 85, both hemispheres 61.2
2622 Female, age 67, right hemisphere 60.0
2693 Female, age 94, both hemispheres 57.7
2532 Female, age 72, left hemisphere 55.1
2018 Male, age 76, both hemispheres 43.4
Perirhinal gyrus
nTPM: 64.9
1847 Female, age 91, left hemisphere 71.7
1841 Female, age 85, right hemisphere 66.8
2848 Male, age 76, right hemisphere 66.4
1794 Male, age 80, right hemisphere 65.1
2521 Female, age 94, right hemisphere 54.5
Subiculum
nTPM: 54.8
1977 Female, age 85, both hemispheres 59.6
2438 Female, age 94, left hemisphere 59.4
2729 Female, age 91, right hemisphere 58.9
2619 Male, age 74, both hemispheres 55.4
1901 Male, age 80, both hemispheres 55.0
2042 Male, age 76, both hemispheres 40.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.6
Samples: 197

Max nTPM: 50.3
Min nTPM: 6.9
Std nTPM: 8.2
Median nTPM: 24.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 50.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 46.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 44.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 44.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 43.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 43.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 42.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 42.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 41.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 38.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 249.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 249.6
FF:10153-102I9 76 years, female 292.0
FF:10169-103B7 60 years, female 207.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 199.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 199.2
Samples: 4

Max nTPM: 212.9
Min nTPM: 186.3
Sample A Male 210.9
Sample B Male 212.9
Sample C Female 186.3
Sample D Female 186.6
Hippocampal formation
nTPM: 187.8
Samples: 4

Max nTPM: 193.0
Min nTPM: 179.5
Sample A Male 191.8
Sample B Male 186.8
Sample C Female 193.0
Sample D Female 179.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.9
393247 Antisense, RP_040804_02_H05, Mouse strain C57BL/6J (56 days, male) 17.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.