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NUDT3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:59.6 nTPM
HPA:59.6 nTPM
GTEx:22.0 nTPM
FANTOM5:144.2 Scaled Tags Per Million
Mouse:141.2 nTPM
Allen mouse:11.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 59.6
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 56.0
2666 Male, age 74, left hemisphere 73.6
2586 Male, age 75, left hemisphere 68.3
1827 Male, age 72, unknown 64.4
2828 Female, age 72, unknown 56.4
2019 Male, age 18, unknown 53.4
2219 Male, age 76, both hemispheres 50.8
1833 Male, age 53, unknown 50.2
2411 Female, age 72, unknown 48.3
1830 Male, age 51, unknown 48.1
1870 Female, age 42, unknown 46.7
Dorsal raphe nucleus
nTPM: 47.8
2016 Female, age 72, unknown 51.2
1828 Male, age 53, unknown 50.9
2298 Female, age 72, unknown 48.9
2047 Male, age 72, unknown 46.3
2750 Male, age 76, both hemispheres 41.8
Inferior colliculus
nTPM: 59.6
1848 Female, age 42, unknown 62.1
2849 Male, age 72, unknown 61.9
1890 Male, age 53, unknown 57.7
2097 Female, age 72, unknown 56.6
Median raphe nucleus
nTPM: 42.1
2220 Male, age 76, midline 42.1
Pedunculopontine tegmental nucleus
nTPM: 45.2
2334 Male, age 80, both hemispheres 51.2
1921 Female, age 85, both hemispheres 47.9
2338 Male, age 61, both hemispheres 36.5
Periaquaductal grey, anterior
nTPM: 58.4
2502 Female, age 75, unknown 64.4
1947 Male, age 18, unknown 56.3
1795 Male, age 51, unknown 54.4
Periaquaductal grey, dorsal
nTPM: 53.4
1840 Male, age 53, unknown 59.4
1831 Male, age 72, unknown 53.4
2464 Female, age 72, unknown 52.3
2850 Male, age 76, both hemispheres 48.6
Periaquaductal grey, lateral
nTPM: 48.1
2053 Male, age 18, unknown 51.9
2140 Male, age 76, both hemispheres 46.9
2272 Male, age 74, both hemispheres 45.6
Pretectal area
nTPM: 57.7
1816 Male, age 51, unknown 70.5
1817 Female, age 42, unknown 65.8
2007 Male, age 72, unknown 65.3
1944 Female, age 72, unknown 63.3
2407 Male, age 75, both hemispheres 61.0
1815 Male, age 53, unknown 58.1
2825 Male, age 18, unknown 52.6
2316 Male, age 76, right hemisphere 51.2
2224 Female, age 72, unknown 50.0
2667 Female, age 75, unknown 49.7
2273 Male, age 74, both hemispheres 47.2
Red nucleus
nTPM: 51.5
2588 Male, age 74, left hemisphere 65.1
2725 Female, age 75, unknown 56.8
2503 Female, age 72, unknown 56.3
2785 Male, age 18, unknown 55.3
2584 Male, age 75, left hemisphere 51.8
1821 Female, age 72, unknown 51.7
2227 Male, age 72, unknown 48.3
2769 Male, age 72, unknown 48.3
1954 Female, age 42, unknown 48.2
1865 Male, age 51, unknown 46.3
1904 Male, age 53, unknown 46.3
2823 Male, age 76, right hemisphere 44.0
Substantia nigra
nTPM: 56.9
2665 Male, age 74, both hemispheres 65.9
1941 Male, age 53, unknown 63.2
1916 Female, age 42, unknown 59.1
2241 Male, age 72, unknown 58.2
1889 Female, age 72, unknown 58.0
1851 Male, age 51, unknown 56.9
2699 Male, age 18, unknown 54.5
2590 Female, age 75, unknown 53.9
2583 Male, age 75, right hemisphere 52.2
2409 Female, age 72, unknown 47.5
Superior colliculus
nTPM: 57.5
2664 Male, age 75, both hemispheres 70.7
2587 Male, age 74, left hemisphere 60.9
2087 Female, age 72, unknown 60.6
1839 Male, age 51, unknown 59.7
2261 Male, age 18, unknown 59.3
1895 Male, age 76, right hemisphere 58.1
1796 Male, age 53, unknown 57.5
2668 Female, age 75, unknown 56.2
1995 Male, age 72, unknown 46.6
1913 Female, age 42, unknown 44.9
Ventral tegmental area
nTPM: 50.1
1915 Female, age 42, unknown 53.6
1942 Male, age 51, unknown 52.6
2410 Female, age 72, unknown 51.4
2218 Male, age 76, both hemispheres 51.2
2021 Male, age 53, unknown 46.3
2223 Female, age 72, unknown 45.6

MIDBRAIN - GTEx RNA-seqi
Average nTPM 22.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 22.0
Samples: 139

Max nTPM: 46.8
Min nTPM: 8.1
Std nTPM: 7.1
Median nTPM: 21.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 46.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ 70-79 years, male 41.9
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 40.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ 60-69 years, male 40.2
GTEX-139TS-0011-R2b-SM-5J1MX 60-69 years, male 39.0
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 38.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 38.0
GTEX-131XH-0011-R2b-SM-5DUVY 50-59 years, male 35.6
GTEX-13SLX-0011-R2b-SM-5S2VP 50-59 years, female 33.4
GTEX-14PN4-0011-R2a-SM-6EU2Y 50-59 years, male 32.5
GTEX-1F6IF-0011-R2b-SM-9QEHB 60-69 years, male 32.3
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 144.2
FF:10158-103A5 76 years, female 144.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 141.2
Mouse sample Sample description nTPM
Midbrain
nTPM: 141.2
Samples: 4

Max nTPM: 149.9
Min nTPM: 133.9
Sample A Male 139.1
Sample B Male 133.9
Sample C Female 141.9
Sample D Female 149.9

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 11.1
393247 Antisense, RP_040804_02_H05, Mouse strain C57BL/6J (56 days, male) 11.1

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