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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:11.8 nTPM
HPA:11.8 nTPM
GTEx:23.2 nTPM
FANTOM5:30.9 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003547
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.8
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
1855 Male, age 76, left hemisphere 13.2
2148 Female, age 91, left hemisphere 12.8
2621 Female, age 67, right hemisphere 12.5
1911 Female, age 85, right hemisphere 12.3
1898 Male, age 80, left hemisphere 10.0
2529 Female, age 94, left hemisphere 10.0
Dentate gyrus
nTPM: 10.5
2010 Male, age 76, both hemispheres 11.3
2528 Male, age 74, both hemispheres 10.9
2531 Female, age 67, both hemispheres 10.9
2530 Female, age 94, left hemisphere 10.6
1927 Female, age 91, both hemispheres 10.1
2246 Female, age 85, both hemispheres 9.0
Entorhinal gyrus
nTPM: 11.8
2117 Female, age 91, right hemisphere 13.5
2764 Male, age 80, right hemisphere 12.5
1787 Male, age 76, left hemisphere 12.0
2613 Female, age 94, left hemisphere 12.0
2686 Male, age 75, right hemisphere 11.8
1938 Female, age 85, left hemisphere 9.0
Hippocampus, CA1
nTPM: 10.6
1873 Female, age 85, both hemispheres 11.6
2082 Female, age 91, right hemisphere 11.1
2749 Male, age 80, left hemisphere 11.1
2527 Male, age 74, both hemispheres 9.8
2045 Male, age 76, both hemispheres 9.2
Hippocampus, CA2
nTPM: 11.3
2113 Female, age 91, right hemisphere 12.8
1940 Female, age 85, left hemisphere 12.0
1963 Male, age 80, left hemisphere 11.2
2249 Male, age 74, both hemispheres 11.2
2437 Female, age 94, left hemisphere 10.5
1892 Male, age 76, both hemispheres 10.2
Hippocampus, CA3
nTPM: 11.3
2861 Female, age 67, both hemispheres 14.6
2620 Female, age 94, left hemisphere 12.7
1867 Male, age 76, both hemispheres 12.3
2436 Male, age 74, both hemispheres 9.9
1891 Female, age 85, both hemispheres 9.2
2137 Male, age 80, left hemisphere 9.1
Parahippocampal cortex
nTPM: 10.8
2018 Male, age 76, both hemispheres 13.0
2692 Male, age 74, both hemispheres 11.9
2250 Female, age 67, right hemisphere 11.3
1933 Female, age 85, both hemispheres 11.1
1990 Female, age 91, right hemisphere 11.0
2693 Female, age 94, both hemispheres 10.9
1850 Male, age 80, both hemispheres 10.6
2622 Female, age 67, right hemisphere 9.8
2245 Female, age 91, both hemispheres 9.4
2532 Female, age 72, left hemisphere 8.4
Perirhinal gyrus
nTPM: 10.3
1794 Male, age 80, right hemisphere 11.4
2521 Female, age 94, right hemisphere 10.7
2848 Male, age 76, right hemisphere 10.7
1841 Female, age 85, right hemisphere 10.1
1847 Female, age 91, left hemisphere 8.7
Subiculum
nTPM: 11.6
2438 Female, age 94, left hemisphere 12.7
2729 Female, age 91, right hemisphere 12.4
2619 Male, age 74, both hemispheres 11.9
1901 Male, age 80, both hemispheres 11.8
2042 Male, age 76, both hemispheres 11.0
1977 Female, age 85, both hemispheres 10.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.2
Samples: 197

Max nTPM: 43.3
Min nTPM: 11.6
Std nTPM: 4.4
Median nTPM: 22.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 43.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 34.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 33.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 31.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 31.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 30.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 30.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 30.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 30.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 30.2
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 30.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.9
FF:10153-102I9 76 years, female 31.4
FF:10169-103B7 60 years, female 30.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.