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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:56.8 nTPM
HPA:56.8 nTPM
GTEx:49.4 nTPM
FANTOM5:571.1 Scaled Tags Per Million
Pig:154.8 nTPM
Mouse:99.2 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067595Antibody HPA069443Antibody CAB022062
Glial cells MediumMediumMedium
Neuronal cells Not detectedNot detectedHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.8
Sample id Sample description nTPM
Hippocampus
nTPM: 54.6
1898 Male, age 80, left hemisphere 60.3
2529 Female, age 94, left hemisphere 58.4
2148 Female, age 91, left hemisphere 53.9
2621 Female, age 67, right hemisphere 52.8
1855 Male, age 76, left hemisphere 51.7
1911 Female, age 85, right hemisphere 50.5
Dentate gyrus
nTPM: 45.1
2528 Male, age 74, both hemispheres 53.9
2010 Male, age 76, both hemispheres 51.6
2530 Female, age 94, left hemisphere 44.7
2246 Female, age 85, both hemispheres 44.4
1927 Female, age 91, both hemispheres 38.8
2531 Female, age 67, both hemispheres 37.2
Entorhinal gyrus
nTPM: 56.8
2117 Female, age 91, right hemisphere 68.8
2613 Female, age 94, left hemisphere 65.1
1938 Female, age 85, left hemisphere 58.3
2764 Male, age 80, right hemisphere 53.4
1787 Male, age 76, left hemisphere 53.1
2686 Male, age 75, right hemisphere 41.8
Hippocampus, CA1
nTPM: 45.3
2527 Male, age 74, both hemispheres 56.0
2045 Male, age 76, both hemispheres 49.5
1873 Female, age 85, both hemispheres 48.5
2082 Female, age 91, right hemisphere 41.6
2749 Male, age 80, left hemisphere 31.1
Hippocampus, CA2
nTPM: 47.0
2249 Male, age 74, both hemispheres 63.8
1940 Female, age 85, left hemisphere 55.3
2113 Female, age 91, right hemisphere 49.6
2437 Female, age 94, left hemisphere 42.8
1963 Male, age 80, left hemisphere 39.0
1892 Male, age 76, both hemispheres 31.4
Hippocampus, CA3
nTPM: 39.4
1891 Female, age 85, both hemispheres 45.4
2861 Female, age 67, both hemispheres 43.7
1867 Male, age 76, both hemispheres 40.7
2436 Male, age 74, both hemispheres 39.0
2620 Female, age 94, left hemisphere 37.6
2137 Male, age 80, left hemisphere 30.0
Parahippocampal cortex
nTPM: 54.4
2250 Female, age 67, right hemisphere 70.8
2245 Female, age 91, both hemispheres 59.3
1933 Female, age 85, both hemispheres 58.7
2622 Female, age 67, right hemisphere 58.6
2018 Male, age 76, both hemispheres 58.1
2532 Female, age 72, left hemisphere 51.8
1990 Female, age 91, right hemisphere 51.1
2693 Female, age 94, both hemispheres 46.8
1850 Male, age 80, both hemispheres 46.5
2692 Male, age 74, both hemispheres 41.9
Perirhinal gyrus
nTPM: 54.0
2521 Female, age 94, right hemisphere 55.5
1841 Female, age 85, right hemisphere 54.9
2848 Male, age 76, right hemisphere 54.0
1847 Female, age 91, left hemisphere 53.5
1794 Male, age 80, right hemisphere 52.2
Subiculum
nTPM: 52.4
2729 Female, age 91, right hemisphere 69.8
2619 Male, age 74, both hemispheres 58.0
1977 Female, age 85, both hemispheres 51.5
2042 Male, age 76, both hemispheres 49.5
2438 Female, age 94, left hemisphere 45.8
1901 Male, age 80, both hemispheres 40.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.4
Samples: 197

Max nTPM: 106.3
Min nTPM: 21.5
Std nTPM: 14.6
Median nTPM: 48.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 106.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 97.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 87.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 86.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 86.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 84.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 80.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 77.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 76.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 74.5
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 73.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 571.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 571.1
FF:10169-103B7 60 years, female 622.5
FF:10153-102I9 76 years, female 519.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 154.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 101.6
Samples: 4

Max nTPM: 127.4
Min nTPM: 67.3
Sample A Female 127.4
Sample B Female 90.6
Sample C Male 120.9
Sample D Male 67.3
Entorhinal cortex
nTPM: 110.9
Samples: 4

Max nTPM: 130.0
Min nTPM: 89.6
Sample A Female 130.0
Sample B Female 96.0
Sample C Male 128.0
Sample D Male 89.6
Subiculum
nTPM: 154.8
Samples: 4

Max nTPM: 202.9
Min nTPM: 125.5
Sample A Female 202.9
Sample B Female 152.1
Sample C Male 138.6
Sample D Male 125.5
Ventral hippocampus
nTPM: 113.1
Samples: 4

Max nTPM: 142.9
Min nTPM: 74.2
Sample A Female 126.1
Sample B Female 109.1
Sample C Male 142.9
Sample D Male 74.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.2
Samples: 4

Max nTPM: 115.9
Min nTPM: 88.0
Sample A Male 94.3
Sample B Male 98.4
Sample C Female 88.0
Sample D Female 115.9
Hippocampal formation
nTPM: 65.0
Samples: 4

Max nTPM: 73.2
Min nTPM: 62.0
Sample A Male 73.2
Sample B Male 62.5
Sample C Female 62.0
Sample D Female 62.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
71487124 Antisense, RP_050913_01_C10, Mouse strain C57BL/6J (56 days, male) 1.5

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