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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		76.855
RNA expressioni
Consensus:35.4 nTPM
HPA:35.4 nTPM
GTEx:36.2 nTPM
FANTOM5:317.4 Scaled Tags Per Million
Pig:125.1 nTPM
Mouse:191.9 nTPM
Allen mouse:12.2 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA014850
Amygdala mean intensity 76.855
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 60.115
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 69.462
Cortical amygdala 46.775
Central amygdala 76.855
Medial amygdaloid nucleus 59.561

AMYGDALA - HPA Brain RNA-seq
Max nTPM 35.4
Sample id Sample description nTPM
Amygdala
nTPM: 30.6
2814 Male, age 76, right hemisphere 153.3
1987 Female, age 91, left hemisphere 0.0
2514 Male, age 75, right hemisphere 0.0
2517 Female, age 94, left hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
Basal amygdala
nTPM: 13.4
1955 Male, age 76, both hemispheres 37.8
2243 Female, age 91, right hemisphere 27.7
2110 Male, age 80, left hemisphere 11.8
2685 Female, age 94, left hemisphere 3.3
2609 Male, age 75, right hemisphere 0.0
2827 Female, age 67, right hemisphere 0.0
Central amygdala
nTPM: 24.8
1905 Male, age 76, both hemispheres 119.6
2239 Male, age 80, left hemisphere 4.6
2515 Male, age 75, right hemisphere 0.0
2701 Female, age 91, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 9.5
2240 Male, age 76, both hemispheres 43.5
2829 Male, age 80, left hemisphere 5.7
2242 Female, age 91, right hemisphere 4.7
2535 Female, age 67, right hemisphere 3.4
2428 Male, age 75, right hemisphere 0.0
2429 Female, age 94, left hemisphere 0.0
Lateral amygdala
nTPM: 32.0
1883 Male, age 76, both hemispheres 146.7
2534 Female, age 94, left hemisphere 45.7
2255 Female, age 91, right hemisphere 0.0
2256 Male, age 80, left hemisphere 0.0
2516 Male, age 75, right hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 35.4
1974 Female, age 91, both hemispheres 68.0
2486 Female, age 94, both hemispheres 38.1
2201 Male, age 74, unknown 0.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 36.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 36.2
Samples: 152

Max nTPM: 178.1
Min nTPM: 2.4
Std nTPM: 33.1
Median nTPM: 23.7
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 178.1
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 161.6
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 160.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 138.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 121.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 113.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 98.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 94.1
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 91.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 90.9
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 88.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 317.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 317.4
FF:10151-102I7 76 years, female 317.4

AMYGDALA - Pig RNA-seqi
Average nTPM 125.1
Pig sample Sample description nTPM
Amygdala
nTPM: 125.1
Samples: 4

Max nTPM: 197.0
Min nTPM: 81.2
Sample A Female 197.0
Sample B Female 81.2
Sample C Male 126.9
Sample D Male 95.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 191.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 191.9
Samples: 4

Max nTPM: 218.3
Min nTPM: 175.7
Sample A Male 194.7
Sample B Male 179.0
Sample C Female 218.3
Sample D Female 175.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 12.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 12.2
73512198 Antisense, RP_050712_04_B04, Mouse strain C57BL/6J (56 days, male) 12.2
70919083 Antisense, RP_050712_04_B04, Mouse strain C57BL/6J (56 days, male) 11.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.