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COLON - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:31.3 nTPM
HPA:26.8 nTPM
GTEx:31.3 nTPM
FANTOM5:64.3 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 26.8
overview Male, age 54 Colon sample 67
nTPM: 22.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview Female, age 57 Colon sample 68
nTPM: 33.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview Male, age 80 Colon sample 69
nTPM: 35.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview Male, age 68 Colon sample 70
nTPM: 24.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 68 Colon sample 76
nTPM: 29.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview Female, age 61 Colon sample 299
nTPM: 27
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview Male, age 80 Colon sample 300
nTPM: 24.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview Female, age 78 Colon sample 368
nTPM: 24.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview Male, age 84 Colon sample 381
nTPM: 22.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview Male, age 80 Colon sample 384
nTPM: 27.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview Female, age 78 Colon sample 389
nTPM: 26.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 69 Colon sample 391
nTPM: 25.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview Female, age 72 Colon sample 403
nTPM: 23.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 31.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 31.3
Samples: 373

Max nTPM: 43.6
Min nTPM: 11.4
Std nTPM: 4.7
Median nTPM: 31.6
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 43.6
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 42.7
GTEX-1S5ZA-1426-SM-E6CJQ 20-29 years, male 41.8
GTEX-1N2DV-1826-SM-E6CJ5 40-49 years, male 41.7
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 41.6
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 41.3
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 41.2
GTEX-18D9A-1326-SM-7LT8P 30-39 years, female 41.1
GTEX-14E1K-1626-SM-664MO 50-59 years, male 40.4
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 40.4
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 40.1
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Colon - Transverse
Average nTPM: 30.5
Samples: 406

Max nTPM: 47.1
Min nTPM: 15.8
Std nTPM: 4.9
Median nTPM: 30.7
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 47.1
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 46.6
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 42.5
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 42.0
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 41.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 41.3
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 41.1
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 41.0
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 40.8
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 40.4
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 40.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 64.3
FF:10014-101C5 62,83,84 years, mixed 64.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.