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COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Low
RNA expressioni
Consensus:8.5 nTPM
HPA:7.0 nTPM
GTEx:8.5 nTPM
FANTOM5:8.9 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA045591Antibody HPA048380Antibody CAB014876
Endothelial cells Medium-Medium
Glandular cells MediumLowHigh
Peripheral nerve/ganglion Low-Medium






COLON - HPA RNA-seqi
Average nTPM 7.0
overview Male, age 54 Colon sample 67
nTPM: 5.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview Female, age 57 Colon sample 68
nTPM: 5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview Male, age 80 Colon sample 69
nTPM: 5.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview Male, age 68 Colon sample 70
nTPM: 5.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 68 Colon sample 76
nTPM: 5.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview Female, age 61 Colon sample 299
nTPM: 7.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview Male, age 80 Colon sample 300
nTPM: 10.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview Female, age 78 Colon sample 368
nTPM: 8.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview Male, age 84 Colon sample 381
nTPM: 9.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview Male, age 80 Colon sample 384
nTPM: 7.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview Female, age 78 Colon sample 389
nTPM: 7.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 69 Colon sample 391
nTPM: 5.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview Female, age 72 Colon sample 403
nTPM: 8.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 8.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 8.5
Samples: 373

Max nTPM: 17.7
Min nTPM: 4.1
Std nTPM: 1.9
Median nTPM: 8.4
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 17.7
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 15.3
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 14.9
GTEX-14E1K-1626-SM-664MO 50-59 years, male 14.2
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 14.0
GTEX-183WM-2526-SM-731BP 70-79 years, female 14.0
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 13.8
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 13.2
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 12.9
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 12.8
GTEX-17HGU-2626-SM-79OKN 50-59 years, male 12.5
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Colon - Transverse
Average nTPM: 7.8
Samples: 406

Max nTPM: 14.8
Min nTPM: 3.5
Std nTPM: 2.2
Median nTPM: 7.5
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 14.8
GTEX-1C6VQ-2726-SM-73KUL 50-59 years, male 14.7
GTEX-R45C-2126-SM-EZ6KZ 60-69 years, female 13.7
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 13.6
GTEX-15UF6-2626-SM-6M466 70-79 years, female 13.5
GTEX-1JJE9-2426-SM-D3L8T 70-79 years, male 13.4
GTEX-1NV5F-2226-SM-DTX8O 60-69 years, female 13.4
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 12.8
GTEX-1HCU7-2626-SM-C1YQO 50-59 years, male 12.7
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 12.6
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 12.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 8.9
FF:10014-101C5 62,83,84 years, mixed 8.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.