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COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: Medium
RNA expressioni
Consensus:4.3 nTPM
HPA:4.3 nTPM
GTEx:3.7 nTPM
FANTOM5:33.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA027181Antibody HPA027322
Endothelial cells MediumMedium
Glandular cells HighHigh
Peripheral nerve/ganglion MediumMedium



COLON - HPA RNA-seqi
Average nTPM 4.3
overview Male, age 54 Colon sample 67
nTPM: 4.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview Female, age 57 Colon sample 68
nTPM: 3.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview Male, age 80 Colon sample 69
nTPM: 4.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview Male, age 68 Colon sample 70
nTPM: 5.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 68 Colon sample 76
nTPM: 3.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview Female, age 61 Colon sample 299
nTPM: 3.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview Male, age 80 Colon sample 300
nTPM: 3.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview Female, age 78 Colon sample 368
nTPM: 4.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview Male, age 84 Colon sample 381
nTPM: 3.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview Male, age 80 Colon sample 384
nTPM: 5.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview Female, age 78 Colon sample 389
nTPM: 4.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 69 Colon sample 391
nTPM: 4.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview Female, age 72 Colon sample 403
nTPM: 4.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 3.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 3.7
Samples: 373

Max nTPM: 6.6
Min nTPM: 1.8
Std nTPM: 0.7
Median nTPM: 3.6
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 6.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 6.1
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 5.9
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 5.8
GTEX-1HSKV-2326-SM-A9SL9 60-69 years, male 5.6
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 5.5
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 5.3
GTEX-15DYW-2426-SM-7KUG8 60-69 years, female 5.3
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 5.3
GTEX-17KNJ-1826-SM-7LT9N 50-59 years, male 5.3
GTEX-1F75W-2126-SM-7RHIA 60-69 years, male 5.3
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Colon - Transverse
Average nTPM: 3.4
Samples: 406

Max nTPM: 5.2
Min nTPM: 1.9
Std nTPM: 0.6
Median nTPM: 3.3
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 5.2
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 5.1
GTEX-1CB4F-2026-SM-79OLU 60-69 years, male 5.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 5.0
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 4.8
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 4.8
GTEX-1B996-2626-SM-73KZ1 60-69 years, male 4.8
GTEX-13QJ3-2626-SM-9OSXQ 50-59 years, male 4.8
GTEX-1GZ4I-2426-SM-9WPPP 50-59 years, male 4.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 4.7
GTEX-1C4CL-2126-SM-7IGQC 30-39 years, male 4.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 33.5
FF:10014-101C5 62,83,84 years, mixed 33.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.