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COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
RNA expressioni
Consensus:23.5 nTPM
HPA:15.3 nTPM
GTEx:23.5 nTPM
FANTOM5:52.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA023689
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 15.3
overview Male, age 54 Colon sample 67
nTPM: 14
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview Female, age 57 Colon sample 68
nTPM: 13.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview Male, age 80 Colon sample 69
nTPM: 12.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview Male, age 68 Colon sample 70
nTPM: 12.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 68 Colon sample 76
nTPM: 9.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview Female, age 61 Colon sample 299
nTPM: 19
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview Male, age 80 Colon sample 300
nTPM: 17.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview Female, age 78 Colon sample 368
nTPM: 17.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview Male, age 84 Colon sample 381
nTPM: 16.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview Male, age 80 Colon sample 384
nTPM: 18.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview Female, age 78 Colon sample 389
nTPM: 15.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 69 Colon sample 391
nTPM: 18.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview Female, age 72 Colon sample 403
nTPM: 15.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 23.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 23.5
Samples: 373

Max nTPM: 38.2
Min nTPM: 10.8
Std nTPM: 4.5
Median nTPM: 23.3
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 38.2
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 35.3
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 34.6
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 34.0
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 33.7
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 33.7
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 33.6
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 33.4
GTEX-1C4CL-1626-SM-7DUF3 30-39 years, male 33.3
GTEX-1GF9X-1426-SM-7RHGX 40-49 years, female 33.2
GTEX-17HGU-2626-SM-79OKN 50-59 years, male 32.8
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Colon - Transverse
Average nTPM: 20.7
Samples: 406

Max nTPM: 35.2
Min nTPM: 9.9
Std nTPM: 3.6
Median nTPM: 20.5
GTEX-11GSP-1626-SM-5986N 60-69 years, female 35.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 33.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 32.5
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 31.8
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 31.6
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 30.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 29.7
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 29.6
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 28.6
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 28.3
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 28.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 52.1
FF:10014-101C5 62,83,84 years, mixed 52.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.