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ARF5
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:152.0 nTPM
HPA:152.0 nTPM
GTEx:154.6 nTPM
FANTOM5:67.7 Scaled Tags Per Million
Pig:64.2 nTPM
Mouse:191.3 nTPM
Allen mouse:7.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 152.0
Sample id Sample description nTPM
Hippocampus
nTPM: 135.4
1898 Male, age 80, left hemisphere 153.7
1855 Male, age 76, left hemisphere 140.1
2621 Female, age 67, right hemisphere 136.4
2148 Female, age 91, left hemisphere 129.4
1911 Female, age 85, right hemisphere 127.1
2529 Female, age 94, left hemisphere 126.0
Dentate gyrus
nTPM: 140.7
2530 Female, age 94, left hemisphere 150.6
1927 Female, age 91, both hemispheres 145.1
2246 Female, age 85, both hemispheres 138.7
2010 Male, age 76, both hemispheres 137.9
2531 Female, age 67, both hemispheres 137.8
2528 Male, age 74, both hemispheres 134.1
Entorhinal gyrus
nTPM: 140.1
2613 Female, age 94, left hemisphere 152.2
2764 Male, age 80, right hemisphere 146.9
1787 Male, age 76, left hemisphere 144.3
1938 Female, age 85, left hemisphere 141.7
2117 Female, age 91, right hemisphere 128.5
2686 Male, age 75, right hemisphere 127.1
Hippocampus, CA1
nTPM: 141.9
2749 Male, age 80, left hemisphere 162.4
2045 Male, age 76, both hemispheres 142.4
1873 Female, age 85, both hemispheres 139.6
2082 Female, age 91, right hemisphere 137.4
2527 Male, age 74, both hemispheres 127.5
Hippocampus, CA2
nTPM: 136.6
1963 Male, age 80, left hemisphere 145.0
2437 Female, age 94, left hemisphere 143.3
1892 Male, age 76, both hemispheres 140.9
2249 Male, age 74, both hemispheres 131.8
1940 Female, age 85, left hemisphere 130.9
2113 Female, age 91, right hemisphere 127.5
Hippocampus, CA3
nTPM: 138.4
2620 Female, age 94, left hemisphere 147.1
2137 Male, age 80, left hemisphere 146.5
2861 Female, age 67, both hemispheres 140.1
1867 Male, age 76, both hemispheres 139.6
2436 Male, age 74, both hemispheres 129.7
1891 Female, age 85, both hemispheres 127.6
Parahippocampal cortex
nTPM: 136.5
1850 Male, age 80, both hemispheres 142.9
1933 Female, age 85, both hemispheres 142.4
2693 Female, age 94, both hemispheres 141.4
2250 Female, age 67, right hemisphere 138.8
1990 Female, age 91, right hemisphere 138.5
2245 Female, age 91, both hemispheres 137.9
2018 Male, age 76, both hemispheres 136.2
2532 Female, age 72, left hemisphere 131.9
2622 Female, age 67, right hemisphere 129.9
2692 Male, age 74, both hemispheres 124.7
Perirhinal gyrus
nTPM: 152.0
1847 Female, age 91, left hemisphere 163.1
1794 Male, age 80, right hemisphere 159.1
1841 Female, age 85, right hemisphere 150.4
2521 Female, age 94, right hemisphere 147.1
2848 Male, age 76, right hemisphere 140.2
Subiculum
nTPM: 133.0
1977 Female, age 85, both hemispheres 143.4
1901 Male, age 80, both hemispheres 137.2
2438 Female, age 94, left hemisphere 132.1
2619 Male, age 74, both hemispheres 130.3
2042 Male, age 76, both hemispheres 127.9
2729 Female, age 91, right hemisphere 126.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 154.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 154.6
Samples: 197

Max nTPM: 371.5
Min nTPM: 48.9
Std nTPM: 53.2
Median nTPM: 155.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 371.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 299.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 295.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 292.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 273.5
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 266.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 262.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 257.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 256.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 250.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 248.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.7
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 64.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 64.2
Samples: 4

Max nTPM: 81.8
Min nTPM: 47.8
Sample A Female 81.8
Sample B Female 69.5
Sample C Male 47.8
Sample D Male 57.7
Entorhinal cortex
nTPM: 49.1
Samples: 4

Max nTPM: 56.8
Min nTPM: 41.0
Sample A Female 50.9
Sample B Female 56.8
Sample C Male 47.5
Sample D Male 41.0
Subiculum
nTPM: 45.6
Samples: 4

Max nTPM: 62.7
Min nTPM: 36.2
Sample A Female 62.7
Sample B Female 41.7
Sample C Male 41.6
Sample D Male 36.2
Ventral hippocampus
nTPM: 56.3
Samples: 4

Max nTPM: 69.2
Min nTPM: 36.5
Sample A Female 56.1
Sample B Female 36.5
Sample C Male 63.3
Sample D Male 69.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 191.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 176.6
Samples: 4

Max nTPM: 189.3
Min nTPM: 169.3
Sample A Male 172.6
Sample B Male 189.3
Sample C Female 169.3
Sample D Female 175.3
Hippocampal formation
nTPM: 191.3
Samples: 4

Max nTPM: 204.5
Min nTPM: 180.6
Sample A Male 194.7
Sample B Male 185.3
Sample C Female 180.6
Sample D Female 204.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.1
69526791 Antisense, RP_050421_01_F05, Mouse strain C57BL/6J (56 days, male) 9.3
81600128 Antisense, RP_080306_04_E09, Mouse strain C57BL/6J (56 days, male) 4.8

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