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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:24.3 nTPM
HPA:24.3 nTPM
GTEx:70.4 nTPM
FANTOM5:45.4 Scaled Tags Per Million
Pig:50.3 nTPM
Mouse:27.2 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043414
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 21.1
1898 Male, age 80, left hemisphere 27.7
2529 Female, age 94, left hemisphere 23.5
2148 Female, age 91, left hemisphere 20.5
2621 Female, age 67, right hemisphere 19.0
1855 Male, age 76, left hemisphere 18.6
1911 Female, age 85, right hemisphere 17.2
Dentate gyrus
nTPM: 23.6
2530 Female, age 94, left hemisphere 30.8
2528 Male, age 74, both hemispheres 27.5
2010 Male, age 76, both hemispheres 25.2
1927 Female, age 91, both hemispheres 22.3
2531 Female, age 67, both hemispheres 19.8
2246 Female, age 85, both hemispheres 15.8
Entorhinal gyrus
nTPM: 24.3
2764 Male, age 80, right hemisphere 31.7
1938 Female, age 85, left hemisphere 26.2
1787 Male, age 76, left hemisphere 25.9
2613 Female, age 94, left hemisphere 22.6
2117 Female, age 91, right hemisphere 22.0
2686 Male, age 75, right hemisphere 17.6
Hippocampus, CA1
nTPM: 22.7
2749 Male, age 80, left hemisphere 31.8
2527 Male, age 74, both hemispheres 25.0
2082 Female, age 91, right hemisphere 20.6
2045 Male, age 76, both hemispheres 18.7
1873 Female, age 85, both hemispheres 17.5
Hippocampus, CA2
nTPM: 22.9
1963 Male, age 80, left hemisphere 29.6
1892 Male, age 76, both hemispheres 24.8
2437 Female, age 94, left hemisphere 23.9
2249 Male, age 74, both hemispheres 22.3
2113 Female, age 91, right hemisphere 19.7
1940 Female, age 85, left hemisphere 17.5
Hippocampus, CA3
nTPM: 19.1
1867 Male, age 76, both hemispheres 21.6
2620 Female, age 94, left hemisphere 21.6
2137 Male, age 80, left hemisphere 21.4
2436 Male, age 74, both hemispheres 16.9
2861 Female, age 67, both hemispheres 16.7
1891 Female, age 85, both hemispheres 16.5
Parahippocampal cortex
nTPM: 21.3
1990 Female, age 91, right hemisphere 27.8
2245 Female, age 91, both hemispheres 27.1
2250 Female, age 67, right hemisphere 22.8
1933 Female, age 85, both hemispheres 22.3
1850 Male, age 80, both hemispheres 21.2
2018 Male, age 76, both hemispheres 21.1
2532 Female, age 72, left hemisphere 21.0
2622 Female, age 67, right hemisphere 18.6
2692 Male, age 74, both hemispheres 17.7
2693 Female, age 94, both hemispheres 13.1
Perirhinal gyrus
nTPM: 23.6
1847 Female, age 91, left hemisphere 29.0
1794 Male, age 80, right hemisphere 27.6
2521 Female, age 94, right hemisphere 21.7
1841 Female, age 85, right hemisphere 20.5
2848 Male, age 76, right hemisphere 19.1
Subiculum
nTPM: 18.6
1977 Female, age 85, both hemispheres 24.9
2619 Male, age 74, both hemispheres 21.1
1901 Male, age 80, both hemispheres 19.1
2729 Female, age 91, right hemisphere 18.7
2042 Male, age 76, both hemispheres 15.0
2438 Female, age 94, left hemisphere 13.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.4
Samples: 197

Max nTPM: 162.3
Min nTPM: 7.0
Std nTPM: 27.3
Median nTPM: 68.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 162.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 156.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 155.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 155.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 153.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 149.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 139.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 135.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 127.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 125.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 124.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.4
FF:10169-103B7 60 years, female 49.1
FF:10153-102I9 76 years, female 41.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.3
Samples: 4

Max nTPM: 67.9
Min nTPM: 38.5
Sample A Female 67.9
Sample B Female 49.5
Sample C Male 45.3
Sample D Male 38.5
Entorhinal cortex
nTPM: 46.8
Samples: 4

Max nTPM: 57.0
Min nTPM: 35.1
Sample A Female 42.2
Sample B Female 57.0
Sample C Male 53.0
Sample D Male 35.1
Subiculum
nTPM: 46.8
Samples: 4

Max nTPM: 65.9
Min nTPM: 37.3
Sample A Female 65.9
Sample B Female 42.3
Sample C Male 41.7
Sample D Male 37.3
Ventral hippocampus
nTPM: 45.7
Samples: 4

Max nTPM: 53.8
Min nTPM: 37.4
Sample A Female 42.8
Sample B Female 37.4
Sample C Male 53.8
Sample D Male 48.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.2
Samples: 4

Max nTPM: 32.9
Min nTPM: 21.0
Sample A Male 32.4
Sample B Male 32.9
Sample C Female 22.6
Sample D Female 21.0
Hippocampal formation
nTPM: 24.9
Samples: 4

Max nTPM: 28.3
Min nTPM: 20.5
Sample A Male 23.0
Sample B Male 27.9
Sample C Female 20.5
Sample D Female 28.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
68744797 Antisense, RP_050208_01_F08, Mouse strain C57BL/6J (56 days, male) 7.3

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