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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:33.7 nTPM
HPA:33.7 nTPM
GTEx:26.8 nTPM
FANTOM5:55.2 Scaled Tags Per Million
Pig:5.2 nTPM
Mouse:50.4 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065232
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.7
Sample id Sample description nTPM
Hippocampus
nTPM: 32.2
1855 Male, age 76, left hemisphere 34.5
1898 Male, age 80, left hemisphere 34.5
1911 Female, age 85, right hemisphere 31.7
2148 Female, age 91, left hemisphere 31.3
2529 Female, age 94, left hemisphere 30.6
2621 Female, age 67, right hemisphere 30.4
Dentate gyrus
nTPM: 31.8
2010 Male, age 76, both hemispheres 34.3
2246 Female, age 85, both hemispheres 32.3
1927 Female, age 91, both hemispheres 31.8
2530 Female, age 94, left hemisphere 31.5
2531 Female, age 67, both hemispheres 30.7
2528 Male, age 74, both hemispheres 30.3
Entorhinal gyrus
nTPM: 31.3
2117 Female, age 91, right hemisphere 32.9
1787 Male, age 76, left hemisphere 32.4
1938 Female, age 85, left hemisphere 32.3
2764 Male, age 80, right hemisphere 31.0
2686 Male, age 75, right hemisphere 30.0
2613 Female, age 94, left hemisphere 29.0
Hippocampus, CA1
nTPM: 33.7
2045 Male, age 76, both hemispheres 40.6
2749 Male, age 80, left hemisphere 34.6
1873 Female, age 85, both hemispheres 32.8
2527 Male, age 74, both hemispheres 30.7
2082 Female, age 91, right hemisphere 29.8
Hippocampus, CA2
nTPM: 31.9
1892 Male, age 76, both hemispheres 35.7
1963 Male, age 80, left hemisphere 32.7
1940 Female, age 85, left hemisphere 31.3
2437 Female, age 94, left hemisphere 31.0
2249 Male, age 74, both hemispheres 30.7
2113 Female, age 91, right hemisphere 30.1
Hippocampus, CA3
nTPM: 31.7
1867 Male, age 76, both hemispheres 36.3
1891 Female, age 85, both hemispheres 33.2
2137 Male, age 80, left hemisphere 32.0
2861 Female, age 67, both hemispheres 30.2
2436 Male, age 74, both hemispheres 29.4
2620 Female, age 94, left hemisphere 29.2
Parahippocampal cortex
nTPM: 30.8
1933 Female, age 85, both hemispheres 33.0
1850 Male, age 80, both hemispheres 32.8
1990 Female, age 91, right hemisphere 32.0
2018 Male, age 76, both hemispheres 31.6
2245 Female, age 91, both hemispheres 30.5
2532 Female, age 72, left hemisphere 30.4
2693 Female, age 94, both hemispheres 29.9
2692 Male, age 74, both hemispheres 29.8
2250 Female, age 67, right hemisphere 29.7
2622 Female, age 67, right hemisphere 28.1
Perirhinal gyrus
nTPM: 31.7
1847 Female, age 91, left hemisphere 32.2
2848 Male, age 76, right hemisphere 31.8
1841 Female, age 85, right hemisphere 31.7
1794 Male, age 80, right hemisphere 31.4
2521 Female, age 94, right hemisphere 31.3
Subiculum
nTPM: 31.7
1901 Male, age 80, both hemispheres 33.8
1977 Female, age 85, both hemispheres 33.1
2042 Male, age 76, both hemispheres 31.4
2729 Female, age 91, right hemisphere 31.3
2619 Male, age 74, both hemispheres 30.5
2438 Female, age 94, left hemisphere 30.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.8
Samples: 197

Max nTPM: 45.2
Min nTPM: 17.1
Std nTPM: 4.6
Median nTPM: 26.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 45.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 44.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 43.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 38.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 38.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 36.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 36.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 36.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 34.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 34.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 34.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.2
FF:10153-102I9 76 years, female 57.1
FF:10169-103B7 60 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.6
Samples: 4

Max nTPM: 5.0
Min nTPM: 4.2
Sample A Female 4.2
Sample B Female 4.8
Sample C Male 4.4
Sample D Male 5.0
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.9
Sample A Female 5.1
Sample B Female 5.3
Sample C Male 4.9
Sample D Male 5.6
Subiculum
nTPM: 4.6
Samples: 4

Max nTPM: 4.9
Min nTPM: 4.1
Sample A Female 4.1
Sample B Female 4.9
Sample C Male 4.8
Sample D Male 4.7
Ventral hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.9
Sample A Female 4.1
Sample B Female 5.0
Sample C Male 3.9
Sample D Male 4.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.4
Samples: 4

Max nTPM: 51.6
Min nTPM: 46.7
Sample A Male 49.5
Sample B Male 51.6
Sample C Female 49.9
Sample D Female 46.7
Hippocampal formation
nTPM: 50.5
Samples: 4

Max nTPM: 54.3
Min nTPM: 45.6
Sample A Male 50.5
Sample B Male 51.4
Sample C Female 54.3
Sample D Female 45.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
67765730 Antisense, RP_040916_01_G03, Mouse strain C57BL/6J (56 days, male) 0.4

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