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IFRD1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:13.9 nTPM
HPA:13.9 nTPM
GTEx:25.6 nTPM
FANTOM5:75.1 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024122Antibody HPA072413
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.9
Sample id Sample description nTPM
Hippocampus
nTPM: 11.0
1855 Male, age 76, left hemisphere 16.6
2529 Female, age 94, left hemisphere 11.4
2148 Female, age 91, left hemisphere 10.4
1911 Female, age 85, right hemisphere 9.9
2621 Female, age 67, right hemisphere 8.9
1898 Male, age 80, left hemisphere 8.6
Dentate gyrus
nTPM: 11.6
2010 Male, age 76, both hemispheres 19.8
2528 Male, age 74, both hemispheres 11.8
2531 Female, age 67, both hemispheres 11.8
2246 Female, age 85, both hemispheres 10.3
1927 Female, age 91, both hemispheres 8.4
2530 Female, age 94, left hemisphere 7.7
Entorhinal gyrus
nTPM: 8.0
1787 Male, age 76, left hemisphere 11.2
2117 Female, age 91, right hemisphere 8.9
2686 Male, age 75, right hemisphere 8.1
2764 Male, age 80, right hemisphere 7.5
1938 Female, age 85, left hemisphere 6.6
2613 Female, age 94, left hemisphere 6.0
Hippocampus, CA1
nTPM: 12.6
2045 Male, age 76, both hemispheres 21.1
2082 Female, age 91, right hemisphere 12.1
2749 Male, age 80, left hemisphere 10.5
2527 Male, age 74, both hemispheres 9.8
1873 Female, age 85, both hemispheres 9.4
Hippocampus, CA2
nTPM: 12.5
1892 Male, age 76, both hemispheres 19.6
2249 Male, age 74, both hemispheres 12.8
2113 Female, age 91, right hemisphere 12.4
1940 Female, age 85, left hemisphere 11.7
1963 Male, age 80, left hemisphere 10.3
2437 Female, age 94, left hemisphere 8.4
Hippocampus, CA3
nTPM: 13.9
1867 Male, age 76, both hemispheres 19.7
2436 Male, age 74, both hemispheres 17.8
2137 Male, age 80, left hemisphere 12.5
2620 Female, age 94, left hemisphere 11.4
2861 Female, age 67, both hemispheres 11.4
1891 Female, age 85, both hemispheres 10.8
Parahippocampal cortex
nTPM: 9.0
2018 Male, age 76, both hemispheres 15.3
2250 Female, age 67, right hemisphere 9.5
2622 Female, age 67, right hemisphere 9.5
2692 Male, age 74, both hemispheres 8.7
1990 Female, age 91, right hemisphere 8.6
2693 Female, age 94, both hemispheres 8.5
1850 Male, age 80, both hemispheres 7.9
2532 Female, age 72, left hemisphere 7.6
2245 Female, age 91, both hemispheres 7.5
1933 Female, age 85, both hemispheres 6.6
Perirhinal gyrus
nTPM: 10.3
2521 Female, age 94, right hemisphere 15.1
2848 Male, age 76, right hemisphere 14.1
1847 Female, age 91, left hemisphere 7.9
1841 Female, age 85, right hemisphere 7.5
1794 Male, age 80, right hemisphere 6.9
Subiculum
nTPM: 10.6
2042 Male, age 76, both hemispheres 15.1
2729 Female, age 91, right hemisphere 12.5
1901 Male, age 80, both hemispheres 10.6
1977 Female, age 85, both hemispheres 10.5
2619 Male, age 74, both hemispheres 8.5
2438 Female, age 94, left hemisphere 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.6
Samples: 197

Max nTPM: 97.6
Min nTPM: 12.9
Std nTPM: 8.0
Median nTPM: 24.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 97.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 51.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 44.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 44.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 39.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 39.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 39.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 38.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 38.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 38.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 37.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.1
FF:10153-102I9 76 years, female 79.1
FF:10169-103B7 60 years, female 71.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.