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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:35.3 nTPM
HPA:35.3 nTPM
GTEx:61.5 nTPM
FANTOM5:110.5 Scaled Tags Per Million
Pig:17.7 nTPM
Mouse:31.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043737
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.3
Sample id Sample description nTPM
Hippocampus
nTPM: 31.9
1911 Female, age 85, right hemisphere 33.5
2529 Female, age 94, left hemisphere 32.9
1898 Male, age 80, left hemisphere 31.7
1855 Male, age 76, left hemisphere 31.5
2621 Female, age 67, right hemisphere 31.2
2148 Female, age 91, left hemisphere 30.5
Dentate gyrus
nTPM: 32.4
2530 Female, age 94, left hemisphere 37.5
2010 Male, age 76, both hemispheres 35.3
2528 Male, age 74, both hemispheres 32.5
2246 Female, age 85, both hemispheres 30.5
2531 Female, age 67, both hemispheres 29.9
1927 Female, age 91, both hemispheres 28.8
Entorhinal gyrus
nTPM: 32.2
2117 Female, age 91, right hemisphere 36.5
2764 Male, age 80, right hemisphere 33.2
2686 Male, age 75, right hemisphere 31.9
1938 Female, age 85, left hemisphere 31.4
1787 Male, age 76, left hemisphere 30.4
2613 Female, age 94, left hemisphere 30.0
Hippocampus, CA1
nTPM: 30.7
1873 Female, age 85, both hemispheres 32.0
2527 Male, age 74, both hemispheres 31.6
2082 Female, age 91, right hemisphere 30.7
2749 Male, age 80, left hemisphere 29.8
2045 Male, age 76, both hemispheres 29.5
Hippocampus, CA2
nTPM: 32.7
1963 Male, age 80, left hemisphere 35.7
2249 Male, age 74, both hemispheres 33.5
2437 Female, age 94, left hemisphere 33.5
1940 Female, age 85, left hemisphere 31.7
2113 Female, age 91, right hemisphere 31.6
1892 Male, age 76, both hemispheres 30.2
Hippocampus, CA3
nTPM: 30.7
1891 Female, age 85, both hemispheres 36.2
1867 Male, age 76, both hemispheres 32.3
2436 Male, age 74, both hemispheres 29.5
2861 Female, age 67, both hemispheres 29.3
2620 Female, age 94, left hemisphere 29.0
2137 Male, age 80, left hemisphere 27.7
Parahippocampal cortex
nTPM: 31.0
2018 Male, age 76, both hemispheres 33.6
2692 Male, age 74, both hemispheres 33.3
2532 Female, age 72, left hemisphere 33.1
1990 Female, age 91, right hemisphere 32.2
1850 Male, age 80, both hemispheres 31.2
1933 Female, age 85, both hemispheres 31.0
2245 Female, age 91, both hemispheres 30.4
2693 Female, age 94, both hemispheres 30.1
2622 Female, age 67, right hemisphere 28.1
2250 Female, age 67, right hemisphere 27.5
Perirhinal gyrus
nTPM: 28.9
2521 Female, age 94, right hemisphere 30.0
1841 Female, age 85, right hemisphere 28.9
1794 Male, age 80, right hemisphere 28.7
2848 Male, age 76, right hemisphere 28.5
1847 Female, age 91, left hemisphere 28.4
Subiculum
nTPM: 35.3
2042 Male, age 76, both hemispheres 42.7
1901 Male, age 80, both hemispheres 37.5
1977 Female, age 85, both hemispheres 34.7
2619 Male, age 74, both hemispheres 32.8
2438 Female, age 94, left hemisphere 32.7
2729 Female, age 91, right hemisphere 31.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.5
Samples: 197

Max nTPM: 214.5
Min nTPM: 19.4
Std nTPM: 33.5
Median nTPM: 51.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 214.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 209.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 160.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 144.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 143.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 142.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 140.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 139.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 134.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 131.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 130.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.5
FF:10153-102I9 76 years, female 156.1
FF:10169-103B7 60 years, female 64.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 20.6
Min nTPM: 12.7
Sample A Female 20.6
Sample B Female 16.8
Sample C Male 20.6
Sample D Male 12.7
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 15.4
Min nTPM: 12.1
Sample A Female 14.4
Sample B Female 15.2
Sample C Male 15.4
Sample D Male 12.1
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 15.9
Min nTPM: 13.4
Sample A Female 15.9
Sample B Female 13.4
Sample C Male 13.6
Sample D Male 14.8
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 20.1
Min nTPM: 12.7
Sample A Female 15.7
Sample B Female 12.7
Sample C Male 20.1
Sample D Male 18.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 30.4
Min nTPM: 23.2
Sample A Male 30.4
Sample B Male 26.1
Sample C Female 29.3
Sample D Female 23.2
Hippocampal formation
nTPM: 31.3
Samples: 4

Max nTPM: 40.5
Min nTPM: 26.8
Sample A Male 27.4
Sample B Male 26.8
Sample C Female 40.5
Sample D Female 30.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69549165 Antisense, RP_050113_02_H12, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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