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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:24.4 nTPM
HPA:24.4 nTPM
GTEx:19.1 nTPM
FANTOM5:61.8 Scaled Tags Per Million
Pig:18.0 nTPM
Mouse:79.6 nTPM
Allen mouse:14.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042781
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.4
Sample id Sample description nTPM
Hippocampus
nTPM: 22.6
2621 Female, age 67, right hemisphere 30.5
1855 Male, age 76, left hemisphere 23.5
1898 Male, age 80, left hemisphere 23.0
2148 Female, age 91, left hemisphere 23.0
1911 Female, age 85, right hemisphere 17.9
2529 Female, age 94, left hemisphere 17.6
Dentate gyrus
nTPM: 23.5
2530 Female, age 94, left hemisphere 27.7
1927 Female, age 91, both hemispheres 24.7
2528 Male, age 74, both hemispheres 23.6
2531 Female, age 67, both hemispheres 23.1
2246 Female, age 85, both hemispheres 21.2
2010 Male, age 76, both hemispheres 21.1
Entorhinal gyrus
nTPM: 18.5
2613 Female, age 94, left hemisphere 23.5
2764 Male, age 80, right hemisphere 19.7
1938 Female, age 85, left hemisphere 17.6
1787 Male, age 76, left hemisphere 17.3
2686 Male, age 75, right hemisphere 16.9
2117 Female, age 91, right hemisphere 16.2
Hippocampus, CA1
nTPM: 23.9
2749 Male, age 80, left hemisphere 31.3
2527 Male, age 74, both hemispheres 25.3
1873 Female, age 85, both hemispheres 25.0
2045 Male, age 76, both hemispheres 20.0
2082 Female, age 91, right hemisphere 17.7
Hippocampus, CA2
nTPM: 22.7
1963 Male, age 80, left hemisphere 33.8
1892 Male, age 76, both hemispheres 26.8
2437 Female, age 94, left hemisphere 21.6
2249 Male, age 74, both hemispheres 21.2
2113 Female, age 91, right hemisphere 17.7
1940 Female, age 85, left hemisphere 14.9
Hippocampus, CA3
nTPM: 24.4
2861 Female, age 67, both hemispheres 33.7
2137 Male, age 80, left hemisphere 26.7
2436 Male, age 74, both hemispheres 24.1
2620 Female, age 94, left hemisphere 24.0
1867 Male, age 76, both hemispheres 19.7
1891 Female, age 85, both hemispheres 18.0
Parahippocampal cortex
nTPM: 19.3
2622 Female, age 67, right hemisphere 23.3
2245 Female, age 91, both hemispheres 22.2
2692 Male, age 74, both hemispheres 21.2
1850 Male, age 80, both hemispheres 20.6
2532 Female, age 72, left hemisphere 20.1
2693 Female, age 94, both hemispheres 19.2
1933 Female, age 85, both hemispheres 18.3
2250 Female, age 67, right hemisphere 16.7
1990 Female, age 91, right hemisphere 15.6
2018 Male, age 76, both hemispheres 15.6
Perirhinal gyrus
nTPM: 20.5
2521 Female, age 94, right hemisphere 23.4
1847 Female, age 91, left hemisphere 22.1
1794 Male, age 80, right hemisphere 20.5
1841 Female, age 85, right hemisphere 18.6
2848 Male, age 76, right hemisphere 18.0
Subiculum
nTPM: 19.3
2438 Female, age 94, left hemisphere 23.9
2619 Male, age 74, both hemispheres 20.9
2729 Female, age 91, right hemisphere 20.1
1901 Male, age 80, both hemispheres 17.9
1977 Female, age 85, both hemispheres 17.5
2042 Male, age 76, both hemispheres 15.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.1
Samples: 197

Max nTPM: 36.1
Min nTPM: 9.2
Std nTPM: 5.2
Median nTPM: 18.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 36.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 35.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 34.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 33.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 31.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 30.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 30.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 30.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 30.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 29.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 29.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.8
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 52.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 19.1
Min nTPM: 13.6
Sample A Female 13.6
Sample B Female 18.0
Sample C Male 14.7
Sample D Male 19.1
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 19.8
Min nTPM: 16.7
Sample A Female 16.7
Sample B Female 18.3
Sample C Male 17.2
Sample D Male 19.8
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 18.1
Min nTPM: 14.5
Sample A Female 14.5
Sample B Female 17.7
Sample C Male 18.1
Sample D Male 16.5
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 18.8
Min nTPM: 13.6
Sample A Female 13.6
Sample B Female 18.2
Sample C Male 17.0
Sample D Male 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.4
Samples: 4

Max nTPM: 86.1
Min nTPM: 68.5
Sample A Male 73.2
Sample B Male 68.5
Sample C Female 77.8
Sample D Female 86.1
Hippocampal formation
nTPM: 79.6
Samples: 4

Max nTPM: 92.4
Min nTPM: 72.8
Sample A Male 72.9
Sample B Male 80.1
Sample C Female 92.4
Sample D Female 72.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.0
69202932 Antisense, RP_050324_04_F09, Mouse strain C57BL/6J (56 days, male) 14.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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