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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.3 nTPM
HPA:12.3 nTPM
GTEx:15.2 nTPM
FANTOM5:10.2 Scaled Tags Per Million
Pig:13.7 nTPM
Mouse:35.1 nTPM
Allen mouse:5.6 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 12.3
Sample id Sample description nTPM
Amygdala
nTPM: 10.1
2814 Male, age 76, right hemisphere 11.7
2517 Female, age 94, left hemisphere 10.6
1987 Female, age 91, left hemisphere 9.6
2695 Female, age 67, right hemisphere 9.5
2514 Male, age 75, right hemisphere 9.2
Basal amygdala
nTPM: 12.2
2685 Female, age 94, left hemisphere 13.9
2827 Female, age 67, right hemisphere 13.6
2243 Female, age 91, right hemisphere 12.2
2609 Male, age 75, right hemisphere 12.0
1955 Male, age 76, both hemispheres 11.1
2110 Male, age 80, left hemisphere 10.4
Central amygdala
nTPM: 12.0
2826 Female, age 94, left hemisphere 15.0
2515 Male, age 75, right hemisphere 11.7
1905 Male, age 76, both hemispheres 11.6
2239 Male, age 80, left hemisphere 11.1
2701 Female, age 91, right hemisphere 10.7
Corticomedial amygdala
nTPM: 11.1
2535 Female, age 67, right hemisphere 12.5
2242 Female, age 91, right hemisphere 11.9
2829 Male, age 80, left hemisphere 11.5
2428 Male, age 75, right hemisphere 11.0
2429 Female, age 94, left hemisphere 10.8
2240 Male, age 76, both hemispheres 9.1
Lateral amygdala
nTPM: 12.3
2534 Female, age 94, left hemisphere 13.4
2256 Male, age 80, left hemisphere 13.3
2830 Female, age 67, right hemisphere 12.9
2255 Female, age 91, right hemisphere 11.9
1883 Male, age 76, both hemispheres 11.8
2516 Male, age 75, right hemisphere 10.6
Stria terminalis, bed nucleus
nTPM: 11.0
1974 Female, age 91, both hemispheres 11.5
2486 Female, age 94, both hemispheres 11.4
2201 Male, age 74, unknown 10.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 15.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 15.2
Samples: 152

Max nTPM: 27.3
Min nTPM: 7.2
Std nTPM: 3.9
Median nTPM: 15.4
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 27.3
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 26.2
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 25.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 25.3
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 23.1
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 23.1
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 22.8
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 22.2
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 21.9
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 21.8
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 21.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 10.2
FF:10151-102I7 76 years, female 10.2

AMYGDALA - Pig RNA-seqi
Average nTPM 13.7
Pig sample Sample description nTPM
Amygdala
nTPM: 13.7
Samples: 4

Max nTPM: 17.9
Min nTPM: 10.7
Sample A Female 17.9
Sample B Female 10.7
Sample C Male 13.6
Sample D Male 12.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 35.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 35.1
Samples: 4

Max nTPM: 38.1
Min nTPM: 31.8
Sample A Male 35.0
Sample B Male 35.6
Sample C Female 38.1
Sample D Female 31.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 5.6
68637993 Antisense, RP_050126_02_A07, Mouse strain C57BL/6J (56 days, male) 5.6

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.