ABOUTMENU
HELP
NEWS
RPUSD1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:12.5 nTPM
HPA:12.5 nTPM
GTEx:16.9 nTPM
FANTOM5:8.1 Scaled Tags Per Million
Pig:16.6 nTPM
Mouse:33.2 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041144Antibody HPA041938
Glial cells LowNot detected
Neuronal cells LowLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
2621 Female, age 67, right hemisphere 13.0
1855 Male, age 76, left hemisphere 12.7
2148 Female, age 91, left hemisphere 12.3
1898 Male, age 80, left hemisphere 11.8
2529 Female, age 94, left hemisphere 11.3
1911 Female, age 85, right hemisphere 11.1
Dentate gyrus
nTPM: 12.0
2530 Female, age 94, left hemisphere 13.0
2531 Female, age 67, both hemispheres 12.6
1927 Female, age 91, both hemispheres 12.4
2010 Male, age 76, both hemispheres 11.9
2246 Female, age 85, both hemispheres 11.5
2528 Male, age 74, both hemispheres 11.0
Entorhinal gyrus
nTPM: 12.3
2613 Female, age 94, left hemisphere 14.0
2764 Male, age 80, right hemisphere 13.6
2686 Male, age 75, right hemisphere 12.8
1787 Male, age 76, left hemisphere 12.3
2117 Female, age 91, right hemisphere 10.6
1938 Female, age 85, left hemisphere 10.4
Hippocampus, CA1
nTPM: 11.8
1873 Female, age 85, both hemispheres 13.0
2749 Male, age 80, left hemisphere 12.7
2045 Male, age 76, both hemispheres 11.6
2527 Male, age 74, both hemispheres 11.3
2082 Female, age 91, right hemisphere 10.3
Hippocampus, CA2
nTPM: 11.6
1892 Male, age 76, both hemispheres 13.3
2437 Female, age 94, left hemisphere 13.0
1963 Male, age 80, left hemisphere 11.3
1940 Female, age 85, left hemisphere 11.1
2249 Male, age 74, both hemispheres 10.7
2113 Female, age 91, right hemisphere 10.1
Hippocampus, CA3
nTPM: 12.5
2861 Female, age 67, both hemispheres 16.2
2620 Female, age 94, left hemisphere 13.7
1867 Male, age 76, both hemispheres 12.3
2137 Male, age 80, left hemisphere 12.2
1891 Female, age 85, both hemispheres 11.1
2436 Male, age 74, both hemispheres 9.6
Parahippocampal cortex
nTPM: 12.1
2622 Female, age 67, right hemisphere 15.8
2693 Female, age 94, both hemispheres 12.4
2018 Male, age 76, both hemispheres 11.9
2250 Female, age 67, right hemisphere 11.8
2532 Female, age 72, left hemisphere 11.8
2692 Male, age 74, both hemispheres 11.8
1933 Female, age 85, both hemispheres 11.7
2245 Female, age 91, both hemispheres 11.5
1990 Female, age 91, right hemisphere 11.4
1850 Male, age 80, both hemispheres 11.3
Perirhinal gyrus
nTPM: 12.1
1794 Male, age 80, right hemisphere 12.6
2521 Female, age 94, right hemisphere 12.3
1841 Female, age 85, right hemisphere 12.0
1847 Female, age 91, left hemisphere 11.9
2848 Male, age 76, right hemisphere 11.6
Subiculum
nTPM: 11.6
2438 Female, age 94, left hemisphere 13.1
2619 Male, age 74, both hemispheres 12.6
2729 Female, age 91, right hemisphere 11.2
1901 Male, age 80, both hemispheres 11.1
2042 Male, age 76, both hemispheres 10.9
1977 Female, age 85, both hemispheres 10.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.9
Samples: 197

Max nTPM: 34.3
Min nTPM: 5.6
Std nTPM: 5.6
Median nTPM: 16.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 34.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 33.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 31.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 30.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 27.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 27.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 27.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 27.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 27.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 27.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.1
FF:10153-102I9 76 years, female 11.1
FF:10169-103B7 60 years, female 5.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.6
Sample A Female 17.0
Sample B Female 15.1
Sample C Male 14.2
Sample D Male 12.6
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.1
Sample A Female 17.1
Sample B Female 13.1
Sample C Male 15.7
Sample D Male 14.9
Subiculum
nTPM: 14.9
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.5
Sample A Female 17.7
Sample B Female 12.5
Sample C Male 16.2
Sample D Male 13.3
Ventral hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 20.6
Min nTPM: 12.9
Sample A Female 16.6
Sample B Female 12.9
Sample C Male 20.6
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.4
Samples: 4

Max nTPM: 32.9
Min nTPM: 25.1
Sample A Male 32.9
Sample B Male 32.4
Sample C Female 31.2
Sample D Female 25.1
Hippocampal formation
nTPM: 33.2
Samples: 4

Max nTPM: 34.6
Min nTPM: 30.9
Sample A Male 34.6
Sample B Male 33.1
Sample C Female 34.1
Sample D Female 30.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
68637993 Antisense, RP_050126_02_A07, Mouse strain C57BL/6J (56 days, male) 3.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.