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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:21.4 nTPM
HPA:21.4 nTPM
GTEx:17.9 nTPM
FANTOM5:45.7 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:9.7 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022923
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
2621 Female, age 67, right hemisphere 26.5
2529 Female, age 94, left hemisphere 26.2
2148 Female, age 91, left hemisphere 20.1
1855 Male, age 76, left hemisphere 19.8
1911 Female, age 85, right hemisphere 19.4
1898 Male, age 80, left hemisphere 16.5
Dentate gyrus
nTPM: 18.2
2531 Female, age 67, both hemispheres 24.9
2530 Female, age 94, left hemisphere 18.8
1927 Female, age 91, both hemispheres 17.7
2246 Female, age 85, both hemispheres 16.9
2528 Male, age 74, both hemispheres 16.1
2010 Male, age 76, both hemispheres 14.9
Entorhinal gyrus
nTPM: 20.2
2613 Female, age 94, left hemisphere 24.5
2686 Male, age 75, right hemisphere 21.9
1787 Male, age 76, left hemisphere 20.7
1938 Female, age 85, left hemisphere 18.5
2117 Female, age 91, right hemisphere 17.8
2764 Male, age 80, right hemisphere 17.6
Hippocampus, CA1
nTPM: 17.3
2527 Male, age 74, both hemispheres 21.7
2082 Female, age 91, right hemisphere 17.8
2749 Male, age 80, left hemisphere 16.7
1873 Female, age 85, both hemispheres 16.6
2045 Male, age 76, both hemispheres 14.0
Hippocampus, CA2
nTPM: 17.7
1963 Male, age 80, left hemisphere 22.4
2113 Female, age 91, right hemisphere 19.1
2437 Female, age 94, left hemisphere 17.6
1940 Female, age 85, left hemisphere 16.4
1892 Male, age 76, both hemispheres 15.8
2249 Male, age 74, both hemispheres 14.7
Hippocampus, CA3
nTPM: 19.3
2861 Female, age 67, both hemispheres 30.2
2620 Female, age 94, left hemisphere 22.0
2137 Male, age 80, left hemisphere 18.6
1867 Male, age 76, both hemispheres 15.2
1891 Female, age 85, both hemispheres 15.2
2436 Male, age 74, both hemispheres 14.5
Parahippocampal cortex
nTPM: 18.9
2622 Female, age 67, right hemisphere 25.6
2245 Female, age 91, both hemispheres 22.5
2250 Female, age 67, right hemisphere 20.5
2692 Male, age 74, both hemispheres 19.8
2532 Female, age 72, left hemisphere 18.7
1933 Female, age 85, both hemispheres 17.9
2018 Male, age 76, both hemispheres 16.6
1850 Male, age 80, both hemispheres 16.0
2693 Female, age 94, both hemispheres 15.9
1990 Female, age 91, right hemisphere 15.5
Perirhinal gyrus
nTPM: 18.8
2521 Female, age 94, right hemisphere 22.4
1794 Male, age 80, right hemisphere 18.4
1847 Female, age 91, left hemisphere 18.2
2848 Male, age 76, right hemisphere 17.9
1841 Female, age 85, right hemisphere 17.1
Subiculum
nTPM: 15.9
2619 Male, age 74, both hemispheres 19.6
2729 Female, age 91, right hemisphere 16.2
2042 Male, age 76, both hemispheres 15.9
1977 Female, age 85, both hemispheres 15.8
1901 Male, age 80, both hemispheres 14.4
2438 Female, age 94, left hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 61.1
Min nTPM: 5.7
Std nTPM: 9.1
Median nTPM: 15.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 61.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 58.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 54.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 52.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 40.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 40.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 40.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 38.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 38.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 36.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 34.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.7
FF:10153-102I9 76 years, female 49.5
FF:10169-103B7 60 years, female 41.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.1
Sample A Female 10.3
Sample B Female 9.5
Sample C Male 8.6
Sample D Male 8.1
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 12.5
Min nTPM: 8.9
Sample A Female 12.0
Sample B Female 8.9
Sample C Male 12.5
Sample D Male 10.4
Subiculum
nTPM: 10.3
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.3
Sample A Female 11.4
Sample B Female 9.3
Sample C Male 10.8
Sample D Male 9.5
Ventral hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 12.3
Min nTPM: 8.3
Sample A Female 8.7
Sample B Female 8.3
Sample C Male 12.3
Sample D Male 9.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.6
Sample A Male 8.9
Sample B Male 9.8
Sample C Female 8.6
Sample D Female 11.4
Hippocampal formation
nTPM: 7.9
Samples: 4

Max nTPM: 8.9
Min nTPM: 6.8
Sample A Male 6.9
Sample B Male 8.8
Sample C Female 6.8
Sample D Female 8.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68798909 Antisense, RP_050217_01_E11, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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