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ELOVL5
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:69.0 nTPM
HPA:69.0 nTPM
GTEx:60.1 nTPM
FANTOM5:317.5 Scaled Tags Per Million
Pig:64.2 nTPM
Mouse:83.7 nTPM
Allen mouse:1.3 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 69.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 61.8
1870 Female, age 42, unknown 73.6
2411 Female, age 72, unknown 73.2
1833 Male, age 53, unknown 71.0
1830 Male, age 51, unknown 70.3
2828 Female, age 72, unknown 61.3
2019 Male, age 18, unknown 60.3
1827 Male, age 72, unknown 54.0
2219 Male, age 76, both hemispheres 52.4
2666 Male, age 74, left hemisphere 52.1
2586 Male, age 75, left hemisphere 49.4
Dorsal raphe nucleus
nTPM: 61.6
2750 Male, age 76, both hemispheres 73.0
2047 Male, age 72, unknown 62.5
1828 Male, age 53, unknown 61.8
2298 Female, age 72, unknown 56.1
2016 Female, age 72, unknown 54.4
Inferior colliculus
nTPM: 54.5
1848 Female, age 42, unknown 58.9
1890 Male, age 53, unknown 54.6
2849 Male, age 72, unknown 54.3
2097 Female, age 72, unknown 50.2
Median raphe nucleus
nTPM: 69.0
2220 Male, age 76, midline 69.0
Pedunculopontine tegmental nucleus
nTPM: 64.9
2334 Male, age 80, both hemispheres 73.4
2338 Male, age 61, both hemispheres 61.5
1921 Female, age 85, both hemispheres 59.6
Periaquaductal grey, anterior
nTPM: 58.6
2502 Female, age 75, unknown 62.7
1947 Male, age 18, unknown 60.9
1795 Male, age 51, unknown 52.2
Periaquaductal grey, dorsal
nTPM: 57.1
2850 Male, age 76, both hemispheres 67.6
2464 Female, age 72, unknown 58.5
1831 Male, age 72, unknown 52.6
1840 Male, age 53, unknown 49.8
Periaquaductal grey, lateral
nTPM: 59.0
2140 Male, age 76, both hemispheres 63.3
2053 Male, age 18, unknown 60.9
2272 Male, age 74, both hemispheres 52.9
Pretectal area
nTPM: 56.2
2667 Female, age 75, unknown 75.6
1815 Male, age 53, unknown 59.3
2825 Male, age 18, unknown 56.6
2316 Male, age 76, right hemisphere 55.4
2273 Male, age 74, both hemispheres 55.2
2224 Female, age 72, unknown 54.9
2407 Male, age 75, both hemispheres 54.7
1817 Female, age 42, unknown 54.5
1944 Female, age 72, unknown 53.6
1816 Male, age 51, unknown 49.3
2007 Male, age 72, unknown 48.8
Red nucleus
nTPM: 68.2
1821 Female, age 72, unknown 83.2
1865 Male, age 51, unknown 80.5
1904 Male, age 53, unknown 78.1
1954 Female, age 42, unknown 75.2
2769 Male, age 72, unknown 71.3
2227 Male, age 72, unknown 69.7
2503 Female, age 72, unknown 64.4
2823 Male, age 76, right hemisphere 61.9
2785 Male, age 18, unknown 61.6
2725 Female, age 75, unknown 58.3
2588 Male, age 74, left hemisphere 57.8
2584 Male, age 75, left hemisphere 56.0
Substantia nigra
nTPM: 63.1
1916 Female, age 42, unknown 87.7
2241 Male, age 72, unknown 73.9
2699 Male, age 18, unknown 69.9
1851 Male, age 51, unknown 65.7
1889 Female, age 72, unknown 61.8
2409 Female, age 72, unknown 61.8
1941 Male, age 53, unknown 57.3
2583 Male, age 75, right hemisphere 55.5
2590 Female, age 75, unknown 48.9
2665 Male, age 74, both hemispheres 48.1
Superior colliculus
nTPM: 57.8
1913 Female, age 42, unknown 67.8
1995 Male, age 72, unknown 61.0
2587 Male, age 74, left hemisphere 60.9
1895 Male, age 76, right hemisphere 60.0
1839 Male, age 51, unknown 59.0
2668 Female, age 75, unknown 58.3
1796 Male, age 53, unknown 55.3
2087 Female, age 72, unknown 54.8
2261 Male, age 18, unknown 51.2
2664 Male, age 75, both hemispheres 50.0
Ventral tegmental area
nTPM: 65.9
2223 Female, age 72, unknown 83.6
2410 Female, age 72, unknown 73.3
1915 Female, age 42, unknown 65.5
2218 Male, age 76, both hemispheres 59.0
2021 Male, age 53, unknown 57.7
1942 Male, age 51, unknown 56.0

MIDBRAIN - GTEx RNA-seqi
Average nTPM 60.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 60.1
Samples: 139

Max nTPM: 134.8
Min nTPM: 25.1
Std nTPM: 20.4
Median nTPM: 55.3
GTEX-WHSE-0011-R2A-SM-3P5ZL 20-29 years, male 134.8
GTEX-1B996-0011-R2a-SM-7IGON 60-69 years, male 124.7
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 117.2
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 112.0
GTEX-14C5O-0011-R2a-SM-5ZZV2 60-69 years, male 110.3
GTEX-N7MT-0011-R2a-SM-2I3GI 60-69 years, female 107.0
GTEX-Q2AG-0011-R2A-SM-2HMIT 40-49 years, female 102.6
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 101.7
GTEX-NPJ7-0011-R2a-SM-2I3GF 60-69 years, female 97.1
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 96.5
GTEX-1B8SG-0011-R2b-SM-79OOT 50-59 years, male 95.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 317.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 317.5
FF:10158-103A5 76 years, female 317.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 64.2
Pig sample Sample description nTPM
Midbrain
nTPM: 64.2
Samples: 4

Max nTPM: 125.2
Min nTPM: 40.9
Sample A Female 125.2
Sample B Female 47.7
Sample C Male 42.9
Sample D Male 40.9
Periaqueductal gray
nTPM: 42.9
Samples: 3

Max nTPM: 45.5
Min nTPM: 38.4
Sample B Female 44.7
Sample C Male 45.5
Sample D Male 38.4
Substantia nigra
nTPM: 56.4
Samples: 4

Max nTPM: 65.9
Min nTPM: 42.8
Sample A Female 57.8
Sample B Female 42.8
Sample C Male 58.9
Sample D Male 65.9
Superior colliculi
nTPM: 50.9
Samples: 4

Max nTPM: 54.6
Min nTPM: 45.6
Sample A Female 54.6
Sample B Female 45.6
Sample C Male 52.7
Sample D Male 50.6

MIDBRAIN - Mouse RNA-seqi
Average nTPM 83.7
Mouse sample Sample description nTPM
Midbrain
nTPM: 83.7
Samples: 4

Max nTPM: 87.2
Min nTPM: 81.6
Sample A Male 81.6
Sample B Male 82.4
Sample C Female 83.7
Sample D Female 87.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.3
71610865 Antisense, RP_050927_02_A05, Mouse strain C57BL/6J (56 days, male) 1.3
74273118 Antisense, RP_050927_02_A05, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.