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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.1 nTPM
HPA:21.1 nTPM
GTEx:17.0 nTPM
FANTOM5:60.8 Scaled Tags Per Million
Pig:19.9 nTPM
Mouse:58.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021220Antibody HPA050722
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.1
Sample id Sample description nTPM
Hippocampus
nTPM: 20.1
2529 Female, age 94, left hemisphere 23.3
2621 Female, age 67, right hemisphere 20.7
1898 Male, age 80, left hemisphere 19.6
2148 Female, age 91, left hemisphere 19.5
1855 Male, age 76, left hemisphere 18.9
1911 Female, age 85, right hemisphere 18.6
Dentate gyrus
nTPM: 19.2
2528 Male, age 74, both hemispheres 20.2
2530 Female, age 94, left hemisphere 20.1
2246 Female, age 85, both hemispheres 19.1
1927 Female, age 91, both hemispheres 18.6
2010 Male, age 76, both hemispheres 18.6
2531 Female, age 67, both hemispheres 18.5
Entorhinal gyrus
nTPM: 20.3
2117 Female, age 91, right hemisphere 21.8
2764 Male, age 80, right hemisphere 21.1
2686 Male, age 75, right hemisphere 21.0
1938 Female, age 85, left hemisphere 20.0
2613 Female, age 94, left hemisphere 19.4
1787 Male, age 76, left hemisphere 18.6
Hippocampus, CA1
nTPM: 20.8
2082 Female, age 91, right hemisphere 24.9
2527 Male, age 74, both hemispheres 22.2
2749 Male, age 80, left hemisphere 20.9
1873 Female, age 85, both hemispheres 18.4
2045 Male, age 76, both hemispheres 17.4
Hippocampus, CA2
nTPM: 20.7
2113 Female, age 91, right hemisphere 23.9
2249 Male, age 74, both hemispheres 22.8
1940 Female, age 85, left hemisphere 21.7
2437 Female, age 94, left hemisphere 19.6
1963 Male, age 80, left hemisphere 18.2
1892 Male, age 76, both hemispheres 18.1
Hippocampus, CA3
nTPM: 20.3
2137 Male, age 80, left hemisphere 25.0
2436 Male, age 74, both hemispheres 22.1
1891 Female, age 85, both hemispheres 19.9
2861 Female, age 67, both hemispheres 18.5
1867 Male, age 76, both hemispheres 18.1
2620 Female, age 94, left hemisphere 18.0
Parahippocampal cortex
nTPM: 20.6
1990 Female, age 91, right hemisphere 21.8
2250 Female, age 67, right hemisphere 21.5
2245 Female, age 91, both hemispheres 21.4
2532 Female, age 72, left hemisphere 21.3
1850 Male, age 80, both hemispheres 21.0
2622 Female, age 67, right hemisphere 20.3
2018 Male, age 76, both hemispheres 20.2
2692 Male, age 74, both hemispheres 20.0
1933 Female, age 85, both hemispheres 19.4
2693 Female, age 94, both hemispheres 18.9
Perirhinal gyrus
nTPM: 21.1
2521 Female, age 94, right hemisphere 23.0
1847 Female, age 91, left hemisphere 22.0
1794 Male, age 80, right hemisphere 21.5
2848 Male, age 76, right hemisphere 19.6
1841 Female, age 85, right hemisphere 19.4
Subiculum
nTPM: 21.0
2729 Female, age 91, right hemisphere 21.8
1901 Male, age 80, both hemispheres 21.6
2438 Female, age 94, left hemisphere 21.2
2619 Male, age 74, both hemispheres 21.2
1977 Female, age 85, both hemispheres 20.6
2042 Male, age 76, both hemispheres 19.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.0
Samples: 197

Max nTPM: 38.4
Min nTPM: 9.6
Std nTPM: 3.4
Median nTPM: 16.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 38.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 26.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 26.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 24.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 24.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 23.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 23.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 23.2
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 23.2
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 22.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 22.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.8
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 49.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 23.0
Min nTPM: 15.7
Sample A Female 23.0
Sample B Female 18.4
Sample C Male 22.5
Sample D Male 15.7
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 20.6
Min nTPM: 16.6
Sample A Female 20.6
Sample B Female 20.1
Sample C Male 18.3
Sample D Male 16.6
Subiculum
nTPM: 19.4
Samples: 4

Max nTPM: 23.7
Min nTPM: 17.0
Sample A Female 23.7
Sample B Female 17.0
Sample C Male 18.0
Sample D Male 19.0
Ventral hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 20.8
Min nTPM: 15.4
Sample A Female 20.3
Sample B Female 15.4
Sample C Male 20.8
Sample D Male 17.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.1
Samples: 4

Max nTPM: 68.6
Min nTPM: 53.3
Sample A Male 53.3
Sample B Male 54.2
Sample C Female 56.4
Sample D Female 68.6
Hippocampal formation
nTPM: 54.7
Samples: 4

Max nTPM: 57.1
Min nTPM: 52.5
Sample A Male 55.2
Sample B Male 54.1
Sample C Female 57.1
Sample D Female 52.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.