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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:27.7 nTPM
HPA:27.7 nTPM
GTEx:23.0 nTPM
FANTOM5:31.5 Scaled Tags Per Million
Pig:23.2 nTPM
Mouse:13.5 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005992
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 25.5
1898 Male, age 80, left hemisphere 32.2
2148 Female, age 91, left hemisphere 29.5
1855 Male, age 76, left hemisphere 24.9
2529 Female, age 94, left hemisphere 24.0
2621 Female, age 67, right hemisphere 23.0
1911 Female, age 85, right hemisphere 19.3
Dentate gyrus
nTPM: 26.4
2528 Male, age 74, both hemispheres 32.2
2530 Female, age 94, left hemisphere 30.6
2010 Male, age 76, both hemispheres 25.9
1927 Female, age 91, both hemispheres 25.5
2246 Female, age 85, both hemispheres 23.2
2531 Female, age 67, both hemispheres 20.8
Entorhinal gyrus
nTPM: 26.4
2613 Female, age 94, left hemisphere 33.3
2117 Female, age 91, right hemisphere 27.3
2764 Male, age 80, right hemisphere 26.6
1938 Female, age 85, left hemisphere 26.0
1787 Male, age 76, left hemisphere 23.9
2686 Male, age 75, right hemisphere 21.4
Hippocampus, CA1
nTPM: 25.3
2749 Male, age 80, left hemisphere 30.0
2527 Male, age 74, both hemispheres 25.9
1873 Female, age 85, both hemispheres 25.6
2082 Female, age 91, right hemisphere 23.8
2045 Male, age 76, both hemispheres 21.4
Hippocampus, CA2
nTPM: 27.7
1963 Male, age 80, left hemisphere 30.8
2437 Female, age 94, left hemisphere 29.6
1892 Male, age 76, both hemispheres 28.6
2113 Female, age 91, right hemisphere 27.0
2249 Male, age 74, both hemispheres 27.0
1940 Female, age 85, left hemisphere 23.4
Hippocampus, CA3
nTPM: 25.5
2436 Male, age 74, both hemispheres 30.5
2620 Female, age 94, left hemisphere 28.8
2861 Female, age 67, both hemispheres 25.4
1867 Male, age 76, both hemispheres 23.8
2137 Male, age 80, left hemisphere 22.5
1891 Female, age 85, both hemispheres 22.2
Parahippocampal cortex
nTPM: 23.7
1990 Female, age 91, right hemisphere 28.1
1933 Female, age 85, both hemispheres 26.9
2692 Male, age 74, both hemispheres 24.7
2245 Female, age 91, both hemispheres 24.1
2250 Female, age 67, right hemisphere 23.8
1850 Male, age 80, both hemispheres 23.5
2622 Female, age 67, right hemisphere 23.1
2018 Male, age 76, both hemispheres 22.2
2532 Female, age 72, left hemisphere 20.3
2693 Female, age 94, both hemispheres 19.9
Perirhinal gyrus
nTPM: 26.3
1847 Female, age 91, left hemisphere 32.7
1794 Male, age 80, right hemisphere 30.7
2521 Female, age 94, right hemisphere 25.1
1841 Female, age 85, right hemisphere 24.2
2848 Male, age 76, right hemisphere 18.7
Subiculum
nTPM: 25.0
2729 Female, age 91, right hemisphere 30.4
2619 Male, age 74, both hemispheres 27.1
2438 Female, age 94, left hemisphere 27.0
1977 Female, age 85, both hemispheres 25.2
1901 Male, age 80, both hemispheres 22.6
2042 Male, age 76, both hemispheres 17.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.0
Samples: 197

Max nTPM: 49.9
Min nTPM: 5.9
Std nTPM: 8.0
Median nTPM: 21.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 49.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 48.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 42.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 42.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 42.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 41.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 41.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 41.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 38.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 37.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.5
FF:10153-102I9 76 years, female 31.8
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.9
Samples: 4

Max nTPM: 32.4
Min nTPM: 14.5
Sample A Female 32.4
Sample B Female 23.1
Sample C Male 21.7
Sample D Male 14.5
Entorhinal cortex
nTPM: 20.3
Samples: 4

Max nTPM: 24.5
Min nTPM: 17.3
Sample A Female 24.5
Sample B Female 18.5
Sample C Male 20.8
Sample D Male 17.3
Subiculum
nTPM: 21.7
Samples: 4

Max nTPM: 31.5
Min nTPM: 16.7
Sample A Female 31.5
Sample B Female 16.7
Sample C Male 20.7
Sample D Male 17.7
Ventral hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 27.7
Min nTPM: 14.7
Sample A Female 23.8
Sample B Female 14.7
Sample C Male 27.7
Sample D Male 26.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 12.2
Min nTPM: 11.8
Sample A Male 12.2
Sample B Male 12.2
Sample C Female 11.8
Sample D Female 11.8
Hippocampal formation
nTPM: 13.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 12.1
Sample A Male 13.2
Sample B Male 13.6
Sample C Female 15.0
Sample D Female 12.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70528444 Antisense, RP_050623_02_F01, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

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