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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:48.1 nTPM
HPA:48.1 nTPM
GTEx:54.3 nTPM
FANTOM5:304.8 Scaled Tags Per Million
Pig:52.5 nTPM
Mouse:102.6 nTPM
Allen mouse:7.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 48.1
Sample id Sample description nTPM
Amygdala
nTPM: 46.1
2514 Male, age 75, right hemisphere 47.8
2814 Male, age 76, right hemisphere 47.8
1987 Female, age 91, left hemisphere 46.1
2517 Female, age 94, left hemisphere 44.3
2695 Female, age 67, right hemisphere 44.3
Basal amygdala
nTPM: 43.5
2243 Female, age 91, right hemisphere 47.2
2609 Male, age 75, right hemisphere 47.2
2685 Female, age 94, left hemisphere 45.1
2110 Male, age 80, left hemisphere 43.4
1955 Male, age 76, both hemispheres 41.4
2827 Female, age 67, right hemisphere 36.5
Central amygdala
nTPM: 46.0
2515 Male, age 75, right hemisphere 50.1
2239 Male, age 80, left hemisphere 47.2
1905 Male, age 76, both hemispheres 46.8
2701 Female, age 91, right hemisphere 43.8
2826 Female, age 94, left hemisphere 42.2
Corticomedial amygdala
nTPM: 43.6
2829 Male, age 80, left hemisphere 48.2
2242 Female, age 91, right hemisphere 47.7
2428 Male, age 75, right hemisphere 46.5
2429 Female, age 94, left hemisphere 41.7
2240 Male, age 76, both hemispheres 41.1
2535 Female, age 67, right hemisphere 36.3
Lateral amygdala
nTPM: 43.3
2516 Male, age 75, right hemisphere 49.6
2255 Female, age 91, right hemisphere 45.5
1883 Male, age 76, both hemispheres 44.6
2256 Male, age 80, left hemisphere 42.8
2534 Female, age 94, left hemisphere 40.5
2830 Female, age 67, right hemisphere 36.5
Stria terminalis, bed nucleus
nTPM: 48.1
1974 Female, age 91, both hemispheres 54.9
2486 Female, age 94, both hemispheres 45.6
2201 Male, age 74, unknown 43.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 54.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 54.3
Samples: 152

Max nTPM: 107.7
Min nTPM: 24.6
Std nTPM: 13.9
Median nTPM: 53.2
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 107.7
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 91.8
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 91.3
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 85.4
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 82.4
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 79.9
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 79.0
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 77.4
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 76.7
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 76.6
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 76.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 304.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 304.8
FF:10151-102I7 76 years, female 304.8

AMYGDALA - Pig RNA-seqi
Average nTPM 52.5
Pig sample Sample description nTPM
Amygdala
nTPM: 52.5
Samples: 4

Max nTPM: 74.5
Min nTPM: 43.4
Sample A Female 74.5
Sample B Female 47.7
Sample C Male 43.4
Sample D Male 44.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 102.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 102.6
Samples: 4

Max nTPM: 109.9
Min nTPM: 99.7
Sample A Male 109.9
Sample B Male 100.5
Sample C Female 99.7
Sample D Female 100.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 7.3
69816936 Antisense, RP_050510_02_C05, Mouse strain C57BL/6J (56 days, male) 14.6
70795527 Antisense, RP_050712_01_G05, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.