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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:12.4 nTPM
HPA:12.4 nTPM
GTEx:12.0 nTPM
FANTOM5:72.9 Scaled Tags Per Million
Pig:62.8 nTPM
Mouse:27.9 nTPM
Allen mouse:14.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053295Antibody HPA060535
Glial cells Not detectedLow
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.2
1911 Female, age 85, right hemisphere 12.0
1898 Male, age 80, left hemisphere 11.7
2148 Female, age 91, left hemisphere 10.0
2529 Female, age 94, left hemisphere 9.7
1855 Male, age 76, left hemisphere 9.5
2621 Female, age 67, right hemisphere 8.5
Dentate gyrus
nTPM: 10.1
2010 Male, age 76, both hemispheres 12.4
2246 Female, age 85, both hemispheres 10.8
1927 Female, age 91, both hemispheres 10.4
2531 Female, age 67, both hemispheres 9.8
2530 Female, age 94, left hemisphere 8.6
2528 Male, age 74, both hemispheres 8.5
Entorhinal gyrus
nTPM: 10.3
1938 Female, age 85, left hemisphere 12.4
1787 Male, age 76, left hemisphere 11.1
2686 Male, age 75, right hemisphere 10.2
2117 Female, age 91, right hemisphere 10.0
2764 Male, age 80, right hemisphere 9.8
2613 Female, age 94, left hemisphere 8.5
Hippocampus, CA1
nTPM: 11.6
2749 Male, age 80, left hemisphere 13.8
1873 Female, age 85, both hemispheres 12.3
2045 Male, age 76, both hemispheres 11.8
2527 Male, age 74, both hemispheres 10.6
2082 Female, age 91, right hemisphere 9.6
Hippocampus, CA2
nTPM: 10.5
1892 Male, age 76, both hemispheres 12.1
1940 Female, age 85, left hemisphere 10.8
1963 Male, age 80, left hemisphere 10.5
2249 Male, age 74, both hemispheres 10.5
2113 Female, age 91, right hemisphere 10.2
2437 Female, age 94, left hemisphere 9.1
Hippocampus, CA3
nTPM: 10.8
2137 Male, age 80, left hemisphere 12.7
1867 Male, age 76, both hemispheres 12.6
1891 Female, age 85, both hemispheres 12.5
2436 Male, age 74, both hemispheres 11.8
2620 Female, age 94, left hemisphere 8.7
2861 Female, age 67, both hemispheres 6.8
Parahippocampal cortex
nTPM: 10.8
1850 Male, age 80, both hemispheres 13.4
2018 Male, age 76, both hemispheres 11.9
1933 Female, age 85, both hemispheres 11.6
2693 Female, age 94, both hemispheres 11.6
1990 Female, age 91, right hemisphere 11.0
2250 Female, age 67, right hemisphere 11.0
2245 Female, age 91, both hemispheres 10.8
2692 Male, age 74, both hemispheres 9.6
2532 Female, age 72, left hemisphere 9.3
2622 Female, age 67, right hemisphere 7.8
Perirhinal gyrus
nTPM: 12.4
1794 Male, age 80, right hemisphere 13.8
1841 Female, age 85, right hemisphere 13.7
1847 Female, age 91, left hemisphere 12.8
2848 Male, age 76, right hemisphere 11.1
2521 Female, age 94, right hemisphere 10.7
Subiculum
nTPM: 10.6
1901 Male, age 80, both hemispheres 12.3
1977 Female, age 85, both hemispheres 11.2
2042 Male, age 76, both hemispheres 10.9
2729 Female, age 91, right hemisphere 10.4
2438 Female, age 94, left hemisphere 10.1
2619 Male, age 74, both hemispheres 8.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.0
Samples: 197

Max nTPM: 23.8
Min nTPM: 6.1
Std nTPM: 3.1
Median nTPM: 11.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 23.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 21.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 21.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 19.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 19.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 18.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 18.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 18.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 18.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 18.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.9
FF:10153-102I9 76 years, female 86.3
FF:10169-103B7 60 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.6
Samples: 4

Max nTPM: 71.3
Min nTPM: 48.8
Sample A Female 71.3
Sample B Female 61.5
Sample C Male 64.8
Sample D Male 48.8
Entorhinal cortex
nTPM: 58.5
Samples: 4

Max nTPM: 62.7
Min nTPM: 52.8
Sample A Female 62.7
Sample B Female 59.8
Sample C Male 58.5
Sample D Male 52.8
Subiculum
nTPM: 62.8
Samples: 4

Max nTPM: 78.5
Min nTPM: 55.4
Sample A Female 78.5
Sample B Female 55.7
Sample C Male 55.4
Sample D Male 61.4
Ventral hippocampus
nTPM: 57.3
Samples: 4

Max nTPM: 64.0
Min nTPM: 49.8
Sample A Female 61.5
Sample B Female 49.8
Sample C Male 53.9
Sample D Male 64.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.9
Samples: 4

Max nTPM: 28.3
Min nTPM: 27.0
Sample A Male 28.3
Sample B Male 28.1
Sample C Female 27.0
Sample D Female 28.3
Hippocampal formation
nTPM: 27.6
Samples: 4

Max nTPM: 29.5
Min nTPM: 25.8
Sample A Male 26.1
Sample B Male 29.5
Sample C Female 28.8
Sample D Female 25.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.0
67815549 Antisense, RP_040920_01_H09, Mouse strain C57BL/6J (56 days, male) 14.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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