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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:53.1 nTPM
HPA:53.1 nTPM
GTEx:47.4 nTPM
FANTOM5:103.8 Scaled Tags Per Million
Pig:9.7 nTPM
Mouse:15.2 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063871Antibody CAB025889
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.1
Sample id Sample description nTPM
Hippocampus
nTPM: 52.4
1898 Male, age 80, left hemisphere 54.9
2621 Female, age 67, right hemisphere 54.2
1911 Female, age 85, right hemisphere 52.8
1855 Male, age 76, left hemisphere 52.2
2529 Female, age 94, left hemisphere 51.8
2148 Female, age 91, left hemisphere 48.2
Dentate gyrus
nTPM: 51.1
2010 Male, age 76, both hemispheres 54.7
2530 Female, age 94, left hemisphere 53.7
2528 Male, age 74, both hemispheres 50.5
2246 Female, age 85, both hemispheres 50.2
1927 Female, age 91, both hemispheres 49.4
2531 Female, age 67, both hemispheres 48.3
Entorhinal gyrus
nTPM: 48.4
2117 Female, age 91, right hemisphere 51.3
1787 Male, age 76, left hemisphere 50.2
1938 Female, age 85, left hemisphere 49.0
2764 Male, age 80, right hemisphere 47.5
2613 Female, age 94, left hemisphere 46.4
2686 Male, age 75, right hemisphere 45.7
Hippocampus, CA1
nTPM: 50.3
1873 Female, age 85, both hemispheres 51.1
2749 Male, age 80, left hemisphere 50.5
2082 Female, age 91, right hemisphere 50.2
2045 Male, age 76, both hemispheres 49.9
2527 Male, age 74, both hemispheres 49.9
Hippocampus, CA2
nTPM: 53.1
1940 Female, age 85, left hemisphere 56.8
1892 Male, age 76, both hemispheres 53.4
2113 Female, age 91, right hemisphere 52.5
2437 Female, age 94, left hemisphere 52.5
2249 Male, age 74, both hemispheres 52.3
1963 Male, age 80, left hemisphere 51.0
Hippocampus, CA3
nTPM: 50.3
1867 Male, age 76, both hemispheres 55.7
1891 Female, age 85, both hemispheres 53.0
2861 Female, age 67, both hemispheres 49.9
2436 Male, age 74, both hemispheres 49.4
2137 Male, age 80, left hemisphere 47.4
2620 Female, age 94, left hemisphere 46.2
Parahippocampal cortex
nTPM: 49.0
2018 Male, age 76, both hemispheres 55.9
2250 Female, age 67, right hemisphere 53.3
1850 Male, age 80, both hemispheres 50.1
2532 Female, age 72, left hemisphere 49.3
1990 Female, age 91, right hemisphere 48.9
1933 Female, age 85, both hemispheres 48.0
2693 Female, age 94, both hemispheres 47.4
2245 Female, age 91, both hemispheres 47.3
2692 Male, age 74, both hemispheres 46.1
2622 Female, age 67, right hemisphere 44.3
Perirhinal gyrus
nTPM: 49.0
1841 Female, age 85, right hemisphere 50.6
2521 Female, age 94, right hemisphere 49.4
1847 Female, age 91, left hemisphere 48.7
1794 Male, age 80, right hemisphere 48.3
2848 Male, age 76, right hemisphere 48.1
Subiculum
nTPM: 52.1
2042 Male, age 76, both hemispheres 57.4
2729 Female, age 91, right hemisphere 53.7
1901 Male, age 80, both hemispheres 52.2
1977 Female, age 85, both hemispheres 49.9
2438 Female, age 94, left hemisphere 49.7
2619 Male, age 74, both hemispheres 49.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.4
Samples: 197

Max nTPM: 170.6
Min nTPM: 13.0
Std nTPM: 21.2
Median nTPM: 43.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 170.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 153.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 103.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 103.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 101.0
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 92.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 91.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 91.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 90.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 86.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 84.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.8
FF:10153-102I9 76 years, female 105.1
FF:10169-103B7 60 years, female 102.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 10.6
Min nTPM: 7.3
Sample A Female 10.5
Sample B Female 9.4
Sample C Male 10.6
Sample D Male 7.3
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 7.0
Sample A Female 10.3
Sample B Female 11.4
Sample C Male 10.1
Sample D Male 7.0
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.4
Sample A Female 10.3
Sample B Female 8.4
Sample C Male 9.2
Sample D Male 9.8
Ventral hippocampus
nTPM: 8.6
Samples: 4

Max nTPM: 9.0
Min nTPM: 8.2
Sample A Female 9.0
Sample B Female 8.6
Sample C Male 8.6
Sample D Male 8.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 16.1
Min nTPM: 14.5
Sample A Male 14.8
Sample B Male 14.5
Sample C Female 16.1
Sample D Female 15.3
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 16.5
Min nTPM: 13.1
Sample A Male 16.5
Sample B Male 13.1
Sample C Female 13.3
Sample D Female 13.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69735257 Antisense, RP_050503_02_D07, Mouse strain C57BL/6J (56 days, male) 1.0

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