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GABARAPL2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:259.7 nTPM
HPA:259.7 nTPM
GTEx:298.6 nTPM
FANTOM5:158.9 Scaled Tags Per Million
Pig:199.4 nTPM
Mouse:167.2 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036726
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 259.7
Sample id Sample description nTPM
Hippocampus
nTPM: 256.6
1898 Male, age 80, left hemisphere 284.2
2529 Female, age 94, left hemisphere 255.4
1855 Male, age 76, left hemisphere 254.4
1911 Female, age 85, right hemisphere 253.5
2148 Female, age 91, left hemisphere 248.0
2621 Female, age 67, right hemisphere 243.8
Dentate gyrus
nTPM: 251.2
2010 Male, age 76, both hemispheres 263.7
1927 Female, age 91, both hemispheres 261.8
2528 Male, age 74, both hemispheres 259.6
2530 Female, age 94, left hemisphere 252.2
2246 Female, age 85, both hemispheres 240.9
2531 Female, age 67, both hemispheres 228.7
Entorhinal gyrus
nTPM: 246.1
2117 Female, age 91, right hemisphere 260.6
1938 Female, age 85, left hemisphere 256.4
2764 Male, age 80, right hemisphere 251.0
1787 Male, age 76, left hemisphere 247.3
2686 Male, age 75, right hemisphere 238.2
2613 Female, age 94, left hemisphere 223.4
Hippocampus, CA1
nTPM: 259.7
2749 Male, age 80, left hemisphere 268.5
1873 Female, age 85, both hemispheres 265.3
2045 Male, age 76, both hemispheres 263.1
2527 Male, age 74, both hemispheres 254.9
2082 Female, age 91, right hemisphere 246.6
Hippocampus, CA2
nTPM: 258.0
2249 Male, age 74, both hemispheres 276.3
1892 Male, age 76, both hemispheres 265.5
1963 Male, age 80, left hemisphere 264.5
1940 Female, age 85, left hemisphere 253.5
2113 Female, age 91, right hemisphere 249.9
2437 Female, age 94, left hemisphere 238.4
Hippocampus, CA3
nTPM: 247.8
1891 Female, age 85, both hemispheres 258.2
1867 Male, age 76, both hemispheres 258.1
2436 Male, age 74, both hemispheres 253.2
2137 Male, age 80, left hemisphere 249.0
2620 Female, age 94, left hemisphere 238.9
2861 Female, age 67, both hemispheres 229.1
Parahippocampal cortex
nTPM: 246.5
2018 Male, age 76, both hemispheres 260.2
1850 Male, age 80, both hemispheres 259.8
1933 Female, age 85, both hemispheres 255.9
1990 Female, age 91, right hemisphere 253.9
2250 Female, age 67, right hemisphere 251.4
2245 Female, age 91, both hemispheres 243.0
2693 Female, age 94, both hemispheres 239.1
2692 Male, age 74, both hemispheres 236.7
2532 Female, age 72, left hemisphere 236.6
2622 Female, age 67, right hemisphere 228.5
Perirhinal gyrus
nTPM: 257.5
1847 Female, age 91, left hemisphere 268.6
1841 Female, age 85, right hemisphere 265.6
1794 Male, age 80, right hemisphere 261.3
2521 Female, age 94, right hemisphere 246.1
2848 Male, age 76, right hemisphere 246.1
Subiculum
nTPM: 247.7
1901 Male, age 80, both hemispheres 257.3
1977 Female, age 85, both hemispheres 256.6
2729 Female, age 91, right hemisphere 254.6
2042 Male, age 76, both hemispheres 251.0
2619 Male, age 74, both hemispheres 242.3
2438 Female, age 94, left hemisphere 224.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 298.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 298.6
Samples: 197

Max nTPM: 707.1
Min nTPM: 134.1
Std nTPM: 59.9
Median nTPM: 289.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 707.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 468.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 454.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 446.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 423.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 420.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 416.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 412.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 401.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 384.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 383.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 158.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 158.9
FF:10169-103B7 60 years, female 178.9
FF:10153-102I9 76 years, female 139.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 199.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 199.4
Samples: 4

Max nTPM: 273.5
Min nTPM: 135.7
Sample A Female 273.5
Sample B Female 192.1
Sample C Male 196.3
Sample D Male 135.7
Entorhinal cortex
nTPM: 173.6
Samples: 4

Max nTPM: 223.8
Min nTPM: 135.7
Sample A Female 161.6
Sample B Female 223.8
Sample C Male 173.1
Sample D Male 135.7
Subiculum
nTPM: 169.3
Samples: 4

Max nTPM: 227.0
Min nTPM: 137.7
Sample A Female 227.0
Sample B Female 167.3
Sample C Male 137.7
Sample D Male 145.0
Ventral hippocampus
nTPM: 170.8
Samples: 4

Max nTPM: 191.4
Min nTPM: 144.3
Sample A Female 191.4
Sample B Female 144.3
Sample C Male 177.4
Sample D Male 170.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 167.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 149.4
Samples: 4

Max nTPM: 159.7
Min nTPM: 137.4
Sample A Male 146.6
Sample B Male 153.7
Sample C Female 159.7
Sample D Female 137.4
Hippocampal formation
nTPM: 167.2
Samples: 4

Max nTPM: 182.8
Min nTPM: 153.9
Sample A Male 182.8
Sample B Male 153.9
Sample C Female 158.4
Sample D Female 173.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
68637778 Antisense, RP_050126_01_F01, Mouse strain C57BL/6J (56 days, male) 5.1

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