ABOUTMENU
HELP
NEWS
SLC66A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.5 nTPM
HPA:12.5 nTPM
GTEx:12.7 nTPM
FANTOM5:7.2 Scaled Tags Per Million
Pig:4.5 nTPM
Mouse:5.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057810
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.9
1855 Male, age 76, left hemisphere 12.5
1911 Female, age 85, right hemisphere 12.2
2148 Female, age 91, left hemisphere 12.2
2529 Female, age 94, left hemisphere 11.8
2621 Female, age 67, right hemisphere 11.8
1898 Male, age 80, left hemisphere 11.2
Dentate gyrus
nTPM: 12.5
2528 Male, age 74, both hemispheres 13.5
2531 Female, age 67, both hemispheres 12.9
2530 Female, age 94, left hemisphere 12.6
2246 Female, age 85, both hemispheres 12.1
2010 Male, age 76, both hemispheres 12.0
1927 Female, age 91, both hemispheres 11.7
Entorhinal gyrus
nTPM: 12.5
2613 Female, age 94, left hemisphere 13.5
2764 Male, age 80, right hemisphere 13.5
2686 Male, age 75, right hemisphere 12.8
2117 Female, age 91, right hemisphere 12.3
1787 Male, age 76, left hemisphere 12.2
1938 Female, age 85, left hemisphere 10.6
Hippocampus, CA1
nTPM: 12.1
1873 Female, age 85, both hemispheres 12.5
2749 Male, age 80, left hemisphere 12.3
2082 Female, age 91, right hemisphere 12.2
2527 Male, age 74, both hemispheres 12.1
2045 Male, age 76, both hemispheres 11.5
Hippocampus, CA2
nTPM: 12.5
2113 Female, age 91, right hemisphere 13.3
1963 Male, age 80, left hemisphere 13.0
2437 Female, age 94, left hemisphere 12.9
2249 Male, age 74, both hemispheres 12.6
1892 Male, age 76, both hemispheres 11.8
1940 Female, age 85, left hemisphere 11.4
Hippocampus, CA3
nTPM: 12.3
2620 Female, age 94, left hemisphere 13.6
2861 Female, age 67, both hemispheres 13.5
2436 Male, age 74, both hemispheres 12.0
1891 Female, age 85, both hemispheres 11.9
1867 Male, age 76, both hemispheres 11.4
2137 Male, age 80, left hemisphere 11.4
Parahippocampal cortex
nTPM: 11.9
2692 Male, age 74, both hemispheres 12.7
2622 Female, age 67, right hemisphere 12.6
2532 Female, age 72, left hemisphere 12.5
2250 Female, age 67, right hemisphere 12.2
2018 Male, age 76, both hemispheres 12.1
2693 Female, age 94, both hemispheres 12.1
1990 Female, age 91, right hemisphere 11.9
1933 Female, age 85, both hemispheres 11.4
1850 Male, age 80, both hemispheres 10.9
2245 Female, age 91, both hemispheres 10.8
Perirhinal gyrus
nTPM: 11.1
2521 Female, age 94, right hemisphere 12.1
1794 Male, age 80, right hemisphere 11.8
2848 Male, age 76, right hemisphere 11.0
1847 Female, age 91, left hemisphere 10.5
1841 Female, age 85, right hemisphere 10.2
Subiculum
nTPM: 12.4
2619 Male, age 74, both hemispheres 13.8
2729 Female, age 91, right hemisphere 13.0
1901 Male, age 80, both hemispheres 12.7
2042 Male, age 76, both hemispheres 12.3
1977 Female, age 85, both hemispheres 11.6
2438 Female, age 94, left hemisphere 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.7
Samples: 197

Max nTPM: 19.9
Min nTPM: 6.4
Std nTPM: 2.6
Median nTPM: 12.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 19.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 18.1
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 18.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 17.0
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 16.9
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 16.8
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 16.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 16.8
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 16.7
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 16.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.2
FF:10153-102I9 76 years, female 9.2
FF:10169-103B7 60 years, female 5.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.9
Samples: 4

Max nTPM: 4.1
Min nTPM: 3.7
Sample A Female 4.0
Sample B Female 3.7
Sample C Male 4.1
Sample D Male 3.7
Entorhinal cortex
nTPM: 4.5
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.9
Sample A Female 5.1
Sample B Female 3.9
Sample C Male 4.6
Sample D Male 4.4
Subiculum
nTPM: 4.5
Samples: 4

Max nTPM: 5.1
Min nTPM: 4.1
Sample A Female 4.1
Sample B Female 4.1
Sample C Male 4.7
Sample D Male 5.1
Ventral hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.6
Sample A Female 3.6
Sample B Female 3.9
Sample C Male 5.1
Sample D Male 4.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.4
Sample A Male 5.7
Sample B Male 4.4
Sample C Female 5.7
Sample D Female 6.5
Hippocampal formation
nTPM: 4.8
Samples: 4

Max nTPM: 6.1
Min nTPM: 3.7
Sample A Male 3.7
Sample B Male 6.1
Sample C Female 4.4
Sample D Female 4.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68161456 Antisense, RP_041122_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.