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LMO3
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:72.8 nTPM
HPA:72.8 nTPM
GTEx:111.3 nTPM
FANTOM5:232.2 Scaled Tags Per Million
Pig:67.9 nTPM
Mouse:230.6 nTPM
Allen mouse:11.8 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 72.8
Sample id Sample description nTPM
Amygdala
nTPM: 50.0
2514 Male, age 75, right hemisphere 63.6
2517 Female, age 94, left hemisphere 58.2
1987 Female, age 91, left hemisphere 55.8
2695 Female, age 67, right hemisphere 42.2
2814 Male, age 76, right hemisphere 30.5
Basal amygdala
nTPM: 64.6
2110 Male, age 80, left hemisphere 78.3
2609 Male, age 75, right hemisphere 72.5
2243 Female, age 91, right hemisphere 69.9
1955 Male, age 76, both hemispheres 61.4
2685 Female, age 94, left hemisphere 60.9
2827 Female, age 67, right hemisphere 44.2
Central amygdala
nTPM: 51.7
2239 Male, age 80, left hemisphere 69.8
2515 Male, age 75, right hemisphere 53.8
2826 Female, age 94, left hemisphere 53.8
2701 Female, age 91, right hemisphere 52.8
1905 Male, age 76, both hemispheres 28.4
Corticomedial amygdala
nTPM: 63.7
2428 Male, age 75, right hemisphere 77.5
2829 Male, age 80, left hemisphere 76.6
2240 Male, age 76, both hemispheres 67.9
2429 Female, age 94, left hemisphere 61.6
2535 Female, age 67, right hemisphere 49.9
2242 Female, age 91, right hemisphere 48.8
Lateral amygdala
nTPM: 59.2
1883 Male, age 76, both hemispheres 68.2
2516 Male, age 75, right hemisphere 65.6
2534 Female, age 94, left hemisphere 63.6
2256 Male, age 80, left hemisphere 62.4
2255 Female, age 91, right hemisphere 58.8
2830 Female, age 67, right hemisphere 36.7
Stria terminalis, bed nucleus
nTPM: 72.8
1974 Female, age 91, both hemispheres 90.1
2486 Female, age 94, both hemispheres 83.5
2201 Male, age 74, unknown 45.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 111.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 111.3
Samples: 152

Max nTPM: 316.5
Min nTPM: 4.0
Std nTPM: 51.2
Median nTPM: 101.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 316.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 269.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 241.4
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 217.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 217.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 215.4
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 213.2
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 199.2
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 194.7
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 194.3
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 194.3
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 232.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 232.2
FF:10151-102I7 76 years, female 232.2

AMYGDALA - Pig RNA-seqi
Average nTPM 67.9
Pig sample Sample description nTPM
Amygdala
nTPM: 67.9
Samples: 4

Max nTPM: 91.2
Min nTPM: 45.1
Sample A Female 91.2
Sample B Female 73.9
Sample C Male 61.5
Sample D Male 45.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 230.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 230.7
Samples: 4

Max nTPM: 258.1
Min nTPM: 200.8
Sample A Male 252.1
Sample B Male 211.6
Sample C Female 200.8
Sample D Female 258.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 11.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 11.8
71281865 Antisense, RP_050818_02_H04, Mouse strain C57BL/6J (56 days, male) 11.8
73616037 Antisense, RP_050818_02_H04, Mouse strain C57BL/6J (56 days, male) 10.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.