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R3HDM1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.5 nTPM
HPA:10.5 nTPM
GTEx:23.6 nTPM
FANTOM5:80.3 Scaled Tags Per Million
Pig:119.2 nTPM
Mouse:86.1 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.5
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 0.0
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 0.0
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2613 Female, age 94, left hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
2764 Male, age 80, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.0
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 0.0
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 5.7
2622 Female, age 67, right hemisphere 24.4
2693 Female, age 94, both hemispheres 18.6
2532 Female, age 72, left hemisphere 7.9
2245 Female, age 91, both hemispheres 6.4
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 10.5
1841 Female, age 85, right hemisphere 21.8
2848 Male, age 76, right hemisphere 16.1
2521 Female, age 94, right hemisphere 12.6
1794 Male, age 80, right hemisphere 2.3
1847 Female, age 91, left hemisphere 0.0
Subiculum
nTPM: 0.0
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.6
Samples: 197

Max nTPM: 94.5
Min nTPM: 6.3
Std nTPM: 14.0
Median nTPM: 20.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 94.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 74.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 71.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 69.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 66.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 66.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 63.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 62.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 62.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 59.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 56.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.3
FF:10153-102I9 76 years, female 95.7
FF:10169-103B7 60 years, female 64.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 119.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.4
Samples: 4

Max nTPM: 53.3
Min nTPM: 37.4
Sample A Female 41.6
Sample B Female 41.3
Sample C Male 53.3
Sample D Male 37.4
Entorhinal cortex
nTPM: 119.2
Samples: 4

Max nTPM: 139.2
Min nTPM: 94.4
Sample A Female 106.8
Sample B Female 139.2
Sample C Male 94.4
Sample D Male 136.4
Subiculum
nTPM: 57.4
Samples: 4

Max nTPM: 62.2
Min nTPM: 51.2
Sample A Female 62.2
Sample B Female 51.2
Sample C Male 54.1
Sample D Male 61.9
Ventral hippocampus
nTPM: 42.1
Samples: 4

Max nTPM: 47.5
Min nTPM: 37.3
Sample A Female 37.3
Sample B Female 40.4
Sample C Male 43.0
Sample D Male 47.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.2
Samples: 4

Max nTPM: 102.3
Min nTPM: 68.7
Sample A Male 88.4
Sample B Male 102.3
Sample C Female 68.7
Sample D Female 85.2
Hippocampal formation
nTPM: 51.3
Samples: 4

Max nTPM: 58.6
Min nTPM: 43.4
Sample A Male 54.7
Sample B Male 48.5
Sample C Female 43.4
Sample D Female 58.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
69133668 Antisense, RP_050321_02_A06, Mouse strain C57BL/6J (56 days, male) 6.0

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The Human Protein Atlas

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