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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:9.6 nTPM
HPA:9.6 nTPM
GTEx:10.7 nTPM
FANTOM5:19.7 Scaled Tags Per Million
Mouse:7.0 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019530
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.6
Sample id Sample description nTPM
Hippocampus
nTPM: 7.8
2148 Female, age 91, left hemisphere 10.6
2529 Female, age 94, left hemisphere 10.4
1911 Female, age 85, right hemisphere 8.9
2621 Female, age 67, right hemisphere 6.9
1898 Male, age 80, left hemisphere 5.3
1855 Male, age 76, left hemisphere 4.6
Dentate gyrus
nTPM: 7.4
2528 Male, age 74, both hemispheres 8.5
2246 Female, age 85, both hemispheres 8.0
2531 Female, age 67, both hemispheres 7.8
1927 Female, age 91, both hemispheres 7.6
2010 Male, age 76, both hemispheres 6.8
2530 Female, age 94, left hemisphere 5.7
Entorhinal gyrus
nTPM: 8.2
2686 Male, age 75, right hemisphere 11.2
1938 Female, age 85, left hemisphere 9.1
2117 Female, age 91, right hemisphere 8.0
2764 Male, age 80, right hemisphere 7.8
2613 Female, age 94, left hemisphere 7.1
1787 Male, age 76, left hemisphere 6.1
Hippocampus, CA1
nTPM: 6.6
2527 Male, age 74, both hemispheres 9.0
1873 Female, age 85, both hemispheres 7.6
2082 Female, age 91, right hemisphere 6.7
2045 Male, age 76, both hemispheres 6.0
2749 Male, age 80, left hemisphere 3.7
Hippocampus, CA2
nTPM: 6.4
2437 Female, age 94, left hemisphere 8.6
2113 Female, age 91, right hemisphere 7.1
1963 Male, age 80, left hemisphere 6.6
1940 Female, age 85, left hemisphere 6.5
2249 Male, age 74, both hemispheres 6.5
1892 Male, age 76, both hemispheres 3.0
Hippocampus, CA3
nTPM: 7.9
2620 Female, age 94, left hemisphere 16.0
2861 Female, age 67, both hemispheres 8.9
1891 Female, age 85, both hemispheres 8.2
2436 Male, age 74, both hemispheres 5.6
2137 Male, age 80, left hemisphere 4.5
1867 Male, age 76, both hemispheres 4.2
Parahippocampal cortex
nTPM: 9.6
2622 Female, age 67, right hemisphere 13.1
2692 Male, age 74, both hemispheres 12.6
2018 Male, age 76, both hemispheres 10.5
1850 Male, age 80, both hemispheres 9.5
2532 Female, age 72, left hemisphere 9.2
2693 Female, age 94, both hemispheres 8.9
1933 Female, age 85, both hemispheres 8.5
1990 Female, age 91, right hemisphere 8.5
2245 Female, age 91, both hemispheres 8.2
2250 Female, age 67, right hemisphere 7.1
Perirhinal gyrus
nTPM: 8.8
1794 Male, age 80, right hemisphere 11.4
1841 Female, age 85, right hemisphere 10.4
2521 Female, age 94, right hemisphere 7.7
1847 Female, age 91, left hemisphere 7.6
2848 Male, age 76, right hemisphere 6.9
Subiculum
nTPM: 9.4
2619 Male, age 74, both hemispheres 12.6
2042 Male, age 76, both hemispheres 10.6
2438 Female, age 94, left hemisphere 9.7
2729 Female, age 91, right hemisphere 9.2
1977 Female, age 85, both hemispheres 7.8
1901 Male, age 80, both hemispheres 6.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.7
Samples: 197

Max nTPM: 21.2
Min nTPM: 4.2
Std nTPM: 3.0
Median nTPM: 10.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 21.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 20.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 19.3
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 19.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 18.4
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 18.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 17.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 17.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 17.2
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 16.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 15.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.7
FF:10153-102I9 76 years, female 23.7
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.2
Sample A Male 8.0
Sample B Male 7.6
Sample C Female 7.2
Sample D Female 5.2
Hippocampal formation
nTPM: 5.1
Samples: 4

Max nTPM: 5.8
Min nTPM: 3.8
Sample A Male 5.2
Sample B Male 5.7
Sample C Female 3.8
Sample D Female 5.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
75084530 Antisense, RP_060412_04_C11, Mouse strain C57BL/6J (56 days, male) 0.5
69782981 Antisense, RP_050505_04_B05, Mouse strain C57BL/6J (56 days, male) 0.5

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.